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ACACA acetyl-CoA carboxylase alpha [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102453486, updated on 10-Mar-2024

Summary

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Gene symbol
ACACA
Gene description
acetyl-CoA carboxylase alpha
See related
Ensembl:ENSPSIG00000011010
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See ACACA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
56
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005871025.1 (4804446..5034928)

NW_005871025.1Genomic Context describing neighboring genes Neighboring gene transcriptional adaptor 2A Neighboring gene chromosome unknown C17orf78 homolog Neighboring gene apoptosis antagonizing transcription factor Neighboring gene LIM homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871025 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acetyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-CoA carboxylase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005871025.1 Reference PelSin_1.0 Primary Assembly

    Range
    4804446..5034928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014581353.2 → XP_014436839.1  acetyl-CoA carboxylase 1 isoform X1

    UniProtKB/TrEMBL
    K7FXF6
    Related
    ENSPSIP00000012716.1, ENSPSIT00000012777.1
    Conserved Domains (8) summary
    COG0439
    Location:118 → 620
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    COG0511
    Location:693 → 818
    AccB; Biotin carboxyl carrier protein [Coenzyme transport and metabolism, Lipid transport and metabolism]
    pfam00289
    Location:118 → 237
    CPSase_L_chain; Carbamoyl-phosphate synthase L chain, N-terminal domain
    pfam00364
    Location:754 → 818
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1669 → 2217
    Carboxyl_trans; Carboxyl transferase domain
    pfam02785
    Location:507 → 614
    Biotin_carb_C; Biotin carboxylase C-terminal domain
    pfam08326
    Location:820 → 1569
    ACC_central; Acetyl-CoA carboxylase, central region
    cl17255
    Location:279 → 470
    ATP-grasp_4; ATP-grasp domain

  2. XM_006138625.3 → XP_006138687.1  acetyl-CoA carboxylase 1 isoform X2

    Conserved Domains (8) summary
    COG0439
    Location:60 → 562
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    COG0511
    Location:635 → 760
    AccB; Biotin carboxyl carrier protein [Coenzyme transport and metabolism, Lipid transport and metabolism]
    pfam00289
    Location:60 → 179
    CPSase_L_chain; Carbamoyl-phosphate synthase L chain, N-terminal domain
    pfam00364
    Location:696 → 760
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1611 → 2159
    Carboxyl_trans; Carboxyl transferase domain
    pfam02785
    Location:449 → 556
    Biotin_carb_C; Biotin carboxylase C-terminal domain
    pfam08326
    Location:762 → 1511
    ACC_central; Acetyl-CoA carboxylase, central region
    cl17255
    Location:221 → 412
    ATP-grasp_4; ATP-grasp domain
Nucleotide Protein
Heading Accession and Version

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