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LOC102229556 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102229556, updated on 22-Oct-2023

Summary

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Gene symbol
LOC102229556
Gene description
putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
See related
Ensembl:ENSXMAG00000016496
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC102229556 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 10 NC_036452.1 (11187337..11194485)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372179.1 (3742612..3748800)

Chromosome 10 - NC_036452.1Genomic Context describing neighboring genes Neighboring gene chromosome 10 C10orf90 homolog Neighboring gene disintegrin and metalloproteinase domain-containing protein 12-like Neighboring gene BRCA2 and CDKN1A interacting protein Neighboring gene uroporphyrinogen III synthase Neighboring gene matrix metallopeptidase 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036452.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    11187337..11194485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005794784.2 → XP_005794841.1  putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32

    UniProtKB/TrEMBL
    M4APZ3
    Related
    ENSXMAP00000016538.2, ENSXMAT00000016562.2
    Conserved Domains (4) summary
    smart00847
    Location:449 → 533
    HA2; Helicase associated domain (HA2) Add an annotation
    COG1643
    Location:20 → 706
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd00046
    Location:76 → 208
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam07717
    Location:572 → 681
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
Nucleotide Protein Strain
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