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ZCCHC10 zinc finger CCHC-type containing 10 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101865737, updated on 7-Jun-2024

Summary

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Gene symbol
ZCCHC10
Gene description
zinc finger CCHC-type containing 10
See related
Ensembl:ENSMFAG00000001259
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ZCCHC10 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 6 NC_088380.1 (139514534..139546084, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 6 NC_052260.1 (128146301..128175324, complement)

Chromosome 6 - NC_088380.1Genomic Context describing neighboring genes Neighboring gene liver enriched antimicrobial peptide 2 Neighboring gene ALF transcription elongation factor 4 Neighboring gene uncharacterized LOC102133690 Neighboring gene V-type proton ATPase subunit e 1-like Neighboring gene cytochrome c oxidase subunit NDUFA4 Neighboring gene uncharacterized LOC135971425 Neighboring gene heat shock protein family A (Hsp70) member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441
  2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCHC domain-containing protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088380.1 Reference T2T-MFA8v1.0

    Range
    139514534..139546084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005557761.4 → XP_005557818.1  zinc finger CCHC domain-containing protein 10 isoform X4

    See identical proteins and their annotated locations for XP_005557818.1

    Related
    ENSMFAP00000008458.1
    Conserved Domains (1) summary
    pfam13917
    Location:17 → 54
    zf-CCHC_3; Zinc knuckle

  2. XM_015451368.3 → XP_015306854.1  zinc finger CCHC domain-containing protein 10 isoform X8

    Conserved Domains (1) summary
    pfam13917
    Location:17 → 56
    zf-CCHC_3; Zinc knuckle

  3. XM_065546738.1 → XP_065402810.1  zinc finger CCHC domain-containing protein 10 isoform X5

  4. XM_065546734.1 → XP_065402806.1  zinc finger CCHC domain-containing protein 10 isoform X2

  5. XM_065546739.1 → XP_065402811.1  zinc finger CCHC domain-containing protein 10 isoform X5

  6. XM_045394226.2 → XP_045250161.1  zinc finger CCHC domain-containing protein 10 isoform X3

    UniProtKB/TrEMBL
    A0A8J8XBW2, G7P896, Q4R5Z6
    Conserved Domains (1) summary
    pfam13917
    Location:39 → 76
    zf-CCHC_3; Zinc knuckle

  7. XM_015451367.3 → XP_015306853.1  zinc finger CCHC domain-containing protein 10 isoform X7

    Conserved Domains (1) summary
    pfam13917
    Location:39 → 78
    zf-CCHC_3; Zinc knuckle

  8. XM_065546737.1 → XP_065402809.1  zinc finger CCHC domain-containing protein 10 isoform X5

  9. XM_065546728.1 → XP_065402800.1  zinc finger CCHC domain-containing protein 10 isoform X2

  10. XM_015451365.3 → XP_015306851.1  zinc finger CCHC domain-containing protein 10 isoform X1

    Conserved Domains (1) summary
    pfam13917
    Location:49 → 86
    zf-CCHC_3; Zinc knuckle

  11. XM_015451366.3 → XP_015306852.1  zinc finger CCHC domain-containing protein 10 isoform X6

    Conserved Domains (1) summary
    pfam13917
    Location:49 → 88
    zf-CCHC_3; Zinc knuckle

  12. XM_065546733.1 → XP_065402805.1  zinc finger CCHC domain-containing protein 10 isoform X2

  13. XM_065546735.1 → XP_065402807.1  zinc finger CCHC domain-containing protein 10 isoform X5

  14. XM_065546727.1 → XP_065402799.1  zinc finger CCHC domain-containing protein 10 isoform X2

  15. XM_065546729.1 → XP_065402801.1  zinc finger CCHC domain-containing protein 10 isoform X2

  16. XM_065546732.1 → XP_065402804.1  zinc finger CCHC domain-containing protein 10 isoform X2

  17. XM_065546736.1 → XP_065402808.1  zinc finger CCHC domain-containing protein 10 isoform X5

  18. XM_065546730.1 → XP_065402802.1  zinc finger CCHC domain-containing protein 10 isoform X2

  19. XM_065546731.1 → XP_065402803.1  zinc finger CCHC domain-containing protein 10 isoform X2

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001283133.1: Suppressed sequence

    Description
    NM_001283133.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
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