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GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 [ Anas platyrhynchos (mallard) ]

Gene ID: 101805478, updated on 8-Mar-2024

Summary

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Gene symbol
GALNT12
Gene description
polypeptide N-acetylgalactosaminyltransferase 12
Locus tag
Anapl_17841
See related
EnsemblRapid:ENSAPLG00030003512
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See GALNT12 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 2 NC_051773.1 (68147655..68195245, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 2 NC_040047.1 (92267461..92315129)

Chromosome 2 - NC_051773.1Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid type B receptor subunit 2 Neighboring gene uncharacterized LOC119715869 Neighboring gene uncharacterized LOC119715868 Neighboring gene ankyrin repeat and sterile alpha motif domain containing 6 Neighboring gene uncharacterized LOC110353403

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 12
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051773.1 Reference ZJU1.0 Primary Assembly

    Range
    68147655..68195245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027451830.2 → XP_027307631.2  polypeptide N-acetylgalactosaminyltransferase 12

    UniProtKB/TrEMBL
    U3IXL8
    Related
    ENSAPLP00030007793.1, ENSAPLT00030009791.1
    Conserved Domains (2) summary
    cd02510
    Location:141 → 435
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:449 → 581
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

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