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CTBP1 C-terminal binding protein 1 [ Anas platyrhynchos (mallard) ]

Gene ID: 101805260, updated on 8-Mar-2024

Summary

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Gene symbol
CTBP1
Gene description
C-terminal binding protein 1
Locus tag
Anapl_00028
See related
EnsemblRapid:ENSAPLG00030011704
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See CTBP1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 4 NC_051775.1 (69342793..69571733)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 4 NC_040049.1 (69399329..69626850)

Chromosome 4 - NC_051775.1Genomic Context describing neighboring genes Neighboring gene UV stimulated scaffold protein A Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene uncharacterized LOC113843430 Neighboring gene uncharacterized LOC106015916 Neighboring gene uncharacterized LOC106015917 Neighboring gene uncharacterized LOC119716781 Neighboring gene spondin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051775.1 Reference ZJU1.0 Primary Assembly

    Range
    69342793..69571733
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027455713.2 → XP_027311514.1  C-terminal-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    R0LTT7
    Conserved Domains (1) summary
    cd05299
    Location:34 → 350
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_027455712.2 → XP_027311513.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    R0LTT7
    Related
    ENSAPLP00030021029.1, ENSAPLT00030030535.1
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_027455711.2 → XP_027311512.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B9ZGN7, R0LTT7
    Related
    ENSAPLP00030021008.1, ENSAPLT00030030491.1
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_038177824.1 → XP_038033752.1  C-terminal-binding protein 1 isoform X6

    UniProtKB/TrEMBL
    R0LTT7
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. XM_027455714.2 → XP_027311515.1  C-terminal-binding protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A493SZP9, A0A8B9ZH37, R0LTT7
    Related
    ENSAPLP00030020984.1, ENSAPLT00030030447.1
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  6. XM_038177821.1 → XP_038033749.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A493T7D5, A0A8B9T8J7, R0LTT7
    Related
    ENSAPLP00030020934.1, ENSAPLT00030030356.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  7. XM_038177823.1 → XP_038033751.1  C-terminal-binding protein 1 isoform X6

    UniProtKB/TrEMBL
    R0LTT7
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  8. XM_038177822.1 → XP_038033750.1  C-terminal-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8B9T7N6, R0LTT7, U3J7P5
    Related
    ENSAPLP00030020959.1, ENSAPLT00030030403.1
    Conserved Domains (1) summary
    cd05299
    Location:26 → 344
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  9. XM_005016132.5 → XP_005016189.1  C-terminal-binding protein 1 isoform X6

    See identical proteins and their annotated locations for XP_005016189.1

    UniProtKB/TrEMBL
    R0LTT7
    Related
    ENSAPLP00030020915.1, ENSAPLT00030030316.1
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

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