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PCYT1A phosphate cytidylyltransferase 1A, choline [ Anas platyrhynchos (mallard) ]

Gene ID: 101803520, updated on 8-Mar-2024

Summary

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Gene symbol
PCYT1A
Gene description
phosphate cytidylyltransferase 1A, choline
Locus tag
Anapl_13649
See related
EnsemblRapid:ENSAPLG00030031624
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See PCYT1A in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 9 NC_051780.1 (10422323..10438630, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 9 NC_040054.1 (10323021..10339014, complement)

Chromosome 9 - NC_051780.1Genomic Context describing neighboring genes Neighboring gene transferrin receptor Neighboring gene solute carrier family 51 member A Neighboring gene dynein light chain Tctex-type 2B Neighboring gene programmed cell death 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline-phosphate cytidylyltransferase A
Names
Choline-phosphate cytidylyltransferase A
phosphate cytidylyltransferase 1, choline, alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051780.1 Reference ZJU1.0 Primary Assembly

    Range
    10422323..10438630 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027464152.2 → XP_027319953.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A493ST02, A0A8B9T7S3, R0L7H3
    Conserved Domains (1) summary
    PLN02413
    Location:72 → 309
    PLN02413; choline-phosphate cytidylyltransferase

  2. XM_038183588.1 → XP_038039516.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A493ST02, A0A8B9T7S3, R0L7H3
    Related
    ENSAPLP00030047014.1, ENSAPLT00030082442.1
    Conserved Domains (1) summary
    PLN02413
    Location:72 → 309
    PLN02413; choline-phosphate cytidylyltransferase

  3. XM_013106194.4 → XP_012961648.1  choline-phosphate cytidylyltransferase A isoform X1

    See identical proteins and their annotated locations for XP_012961648.1

    UniProtKB/TrEMBL
    A0A493ST02, A0A8B9T7S3, R0L7H3
    Related
    ENSAPLP00030047009.1, ENSAPLT00030082433.1
    Conserved Domains (1) summary
    PLN02413
    Location:72 → 309
    PLN02413; choline-phosphate cytidylyltransferase

  4. XM_021277091.3 → XP_021132766.1  choline-phosphate cytidylyltransferase A isoform X2

    UniProtKB/TrEMBL
    A0A8B9T7S3
    Related
    ENSAPLP00030047006.1, ENSAPLT00030082427.1
    Conserved Domains (1) summary
    cl28626
    Location:5 → 242
    PLN02406; ethanolamine-phosphate cytidylyltransferase
Nucleotide Protein
Heading Accession and Version

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