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DCP2 decapping mRNA 2 [ Anas platyrhynchos (mallard) ]

Gene ID: 101801466, updated on 8-Mar-2024

Summary

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Gene symbol
DCP2
Gene description
decapping mRNA 2
Locus tag
Anapl_16964
See related
EnsemblRapid:ENSAPLG00030010392
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See DCP2 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
11
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) Z NC_051804.1 (62222952..62255144)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) Z NC_040075.1 (57291227..57323409)

Chromosome Z - NC_051804.1Genomic Context describing neighboring genes Neighboring gene signal recognition particle 19 Neighboring gene receptor accessory protein 5 Neighboring gene uncharacterized LOC119714591 Neighboring gene MCC regulator of WNT signaling pathway Neighboring gene uncharacterized LOC119714589 Neighboring gene YTH N6-methyladenosine RNA binding protein C2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deadenylation-dependent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
m7GpppN-mRNA hydrolase
Names
mRNA-decapping enzyme 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051804.1 Reference ZJU1.0 Primary Assembly

    Range
    62222952..62255144
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027446648.2 → XP_027302449.1  m7GpppN-mRNA hydrolase isoform X2

    UniProtKB/TrEMBL
    A0A8B9SH83
    Related
    ENSAPLP00030018872.1, ENSAPLT00030026919.1

  2. XM_027446649.2 → XP_027302450.1  m7GpppN-mRNA hydrolase isoform X1

    UniProtKB/TrEMBL
    A0A8B9SH83
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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