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CPO carboxypeptidase O [ Anas platyrhynchos (mallard) ]

Gene ID: 101800234, updated on 16-Mar-2024

Summary

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Gene symbol
CPO
Gene description
carboxypeptidase O
Locus tag
Anapl_00664
See related
EnsemblRapid:ENSAPLG00030030559
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See CPO in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 7 NC_051778.1 (26979314..26992374)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 7 NC_040052.1 (16998761..17013258, complement)

Chromosome 7 - NC_051778.1Genomic Context describing neighboring genes Neighboring gene dystrotelin Neighboring gene family with sequence similarity 237 member A Neighboring gene FAST kinase domains 2 Neighboring gene malate dehydrogenase 1B Neighboring gene uncharacterized LOC119717550 Neighboring gene KLF transcription factor 7 Neighboring gene cAMP responsive element binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxypeptidase O

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051778.1 Reference ZJU1.0 Primary Assembly

    Range
    26979314..26992374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013096891.4 → XP_012952345.3  carboxypeptidase O

    UniProtKB/TrEMBL
    U3IGG5
    Related
    ENSAPLP00030045924.1, ENSAPLT00030079632.1
    Conserved Domains (2) summary
    pfam02244
    Location:57 → 124
    Propep_M14; Carboxypeptidase activation peptide
    cl11393
    Location:141 → 437
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins
Nucleotide Protein
Heading Accession and Version

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