U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 [ Anas platyrhynchos (mallard) ]

Gene ID: 101799589, updated on 19-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
ORMDL1
Gene description
ORMDL sphingolipid biosynthesis regulator 1
Locus tag
Anapl_10017
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ORMDL1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 7 NC_051778.1 (35462494..35469837, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 7 NC_040052.1 (8493970..8501558)

Chromosome 7 - NC_051778.1Genomic Context describing neighboring genes Neighboring gene ASNSD1 upstream open reading frame Neighboring gene asparagine synthetase domain containing 1 Neighboring gene O-sialoglycoprotein endopeptidase like 1 Neighboring gene PMS1 homolog 1, mismatch repair system component Neighboring gene uncharacterized LOC106014514 Neighboring gene uncharacterized LOC101801054 Neighboring gene myostatin

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sphingolipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ORM1-like protein 1
Names
ORM1-like 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051778.1 Reference ZJU1.0 Primary Assembly

    Range
    35462494..35469837 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027460980.2 → XP_027316781.1  ORM1-like protein 1

    UniProtKB/TrEMBL
    R0KBM9
    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family

  2. XM_038182371.1 → XP_038038299.1  ORM1-like protein 1

    UniProtKB/TrEMBL
    R0KBM9
    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family

  3. XM_038182370.1 → XP_038038298.1  ORM1-like protein 1

    UniProtKB/TrEMBL
    R0KBM9
    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family

  4. XM_005011405.5 → XP_005011462.1  ORM1-like protein 1

    See identical proteins and their annotated locations for XP_005011462.1

    UniProtKB/TrEMBL
    R0KBM9
    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.