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KIRREL3 kirre like nephrin family adhesion molecule 3 [ Anas platyrhynchos (mallard) ]

Gene ID: 101799183, updated on 8-Mar-2024

Summary

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Gene symbol
KIRREL3
Gene description
kirre like nephrin family adhesion molecule 3
Locus tag
Anapl_03992
See related
EnsemblRapid:ENSAPLG00030008282
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See KIRREL3 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
17
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 25 NC_051796.1 (632611..945067, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 25 NC_040070.1 (499330..812515, complement)

Chromosome 25 - NC_051796.1Genomic Context describing neighboring genes Neighboring gene decapping enzyme, scavenger Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene uncharacterized LOC106017130 Neighboring gene uncharacterized LOC119713699 Neighboring gene uncharacterized LOC106017131 Neighboring gene uncharacterized LOC101793096

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3
Names
Kin of IRRE-like protein 3
kin of IRRE like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051796.1 Reference ZJU1.0 Primary Assembly

    Range
    632611..945067 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027444097.2 → XP_027299898.1  kin of IRRE-like protein 3 isoform X3

    UniProtKB/TrEMBL
    U3I4U0
    Related
    ENSAPLP00030016222.1, ENSAPLT00030022162.1
    Conserved Domains (4) summary
    cd00096
    Location:319 → 323
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:125 → 222
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:394 → 491
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:311 → 392
    Ig; Immunoglobulin domain

  2. XM_027444096.2 → XP_027299897.1  kin of IRRE-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A493TQG1
    Related
    ENSAPLP00030016156.1, ENSAPLT00030022075.1
    Conserved Domains (4) summary
    cd00096
    Location:345 → 349
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:151 → 248
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:420 → 517
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:337 → 418
    Ig; Immunoglobulin domain

  3. XM_027444095.2 → XP_027299896.1  kin of IRRE-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A493U323
    Related
    ENSAPLP00030015979.1, ENSAPLT00030021828.1
    Conserved Domains (4) summary
    cd00096
    Location:345 → 349
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:151 → 248
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:420 → 517
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:337 → 418
    Ig; Immunoglobulin domain
Nucleotide Protein
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