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MEF2D myocyte enhancer factor 2D [ Anas platyrhynchos (mallard) ]

Gene ID: 101799116, updated on 8-Mar-2024

Summary

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Gene symbol
MEF2D
Gene description
myocyte enhancer factor 2D
See related
EnsemblRapid:ENSAPLG00030011907
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See MEF2D in Genome Data Viewer
Location:
chromosome: 26
Exon count:
12
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 26 NC_051797.1 (97319..153514, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 26 NC_040071.1 (170672..195529, complement)

Chromosome 26 - NC_051797.1Genomic Context describing neighboring genes Neighboring gene hyaluronan and proteoglycan link protein 2 Neighboring gene Rh family B glycoprotein Neighboring gene uncharacterized LOC110353098 Neighboring gene IQ motif containing GTPase activating protein 3 Neighboring gene tetratricopeptide repeat domain 24

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Discovery, Characterization, and Functional Study of a Novel MEF2D CAG Repeat in Duck (Anas platyrhynchos). Wang Y, et al. DNA Cell Biol, 2016 Aug. PMID 27064738

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: myocyte-specific enhancer factor 2D
Names
myocyte-specific enhancer factor 2D homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051797.1 Reference ZJU1.0 Primary Assembly

    Range
    97319..153514 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038167813.1 → XP_038023741.1  LOW QUALITY PROTEIN: myocyte-specific enhancer factor 2D

    UniProtKB/TrEMBL
    A0A126XWB9, A0A493TE09, A0A8B9TJT3
    Related
    ENSAPLP00030021207.1, ENSAPLT00030030876.1
    Conserved Domains (2) summary
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97 → 151
    HJURP_C; Holliday junction regulator protein family C-terminal repeat
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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