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LOC101797528 torsin-1A-interacting protein 2 [ Anas platyrhynchos (mallard) ]

Gene ID: 101797528, updated on 7-Dec-2023

Summary

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Gene symbol
LOC101797528
Gene description
torsin-1A-interacting protein 2
Locus tag
Anapl_05600
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Also known as
TOR1AIP2
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Genomic context

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See LOC101797528 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 8 NC_051779.1 (11268172..11277497)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 8 NC_040053.1 (25376118..25386043, complement)

Chromosome 8 - NC_051779.1Genomic Context describing neighboring genes Neighboring gene quiescin sulfhydryl oxidase 1 Neighboring gene centrosomal protein 350 Neighboring gene uncharacterized LOC119717638 Neighboring gene torsin-1A-interacting protein 1 Neighboring gene ADAMTS-like protein 2 Neighboring gene uncharacterized LOC110352681 Neighboring gene family with sequence similarity 163 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: torsin-1A-interacting protein 2
Names
torsin A interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051779.1 Reference ZJU1.0 Primary Assembly

    Range
    11268172..11277497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038183225.1 → XP_038039153.1  LOW QUALITY PROTEIN: torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    A0A8B9TSM9
    Conserved Domains (1) summary
    pfam05609
    Location:76 → 514
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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