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MBL mannose-binding lectin [ Anas platyrhynchos (mallard) ]

Gene ID: 101797467, updated on 7-Dec-2023

Summary

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Gene symbol
MBL
Gene description
mannose-binding lectin
Locus tag
Anapl_00212
See related
EnsemblRapid:ENSAPLG00030003570
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
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Genomic context

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See MBL in Genome Data Viewer
Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 6 NC_051777.1 (11205238..11237187, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 6 NC_040051.1 (26598050..26608208)

Chromosome 6 - NC_051777.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101798065 Neighboring gene pulmonary surfactant-associated protein A Neighboring gene uncharacterized LOC101797051 Neighboring gene RasGEF domain family member 1A Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein
Names
Collectin-46

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051777.1 Reference ZJU1.0 Primary Assembly

    Range
    11205238..11237187 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038180828.1 → XP_038036756.1  mannose-binding protein

    UniProtKB/TrEMBL
    A0A8B9TGP5, U3ICR2
    Conserved Domains (3) summary
    pfam09006
    Location:104 → 149
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerisation
    pfam01391
    Location:47 → 100
    Collagen; Collagen triple helix repeat (20 copies)
    cl02432
    Location:142 → 254
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  2. XM_038180829.1 → XP_038036757.1  mannose-binding protein

    UniProtKB/TrEMBL
    A0A8B9TGP5, U3ICR2
    Conserved Domains (3) summary
    pfam09006
    Location:104 → 149
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerisation
    pfam01391
    Location:47 → 100
    Collagen; Collagen triple helix repeat (20 copies)
    cl02432
    Location:142 → 254
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  3. XM_038180831.1 → XP_038036759.1  mannose-binding protein

    UniProtKB/TrEMBL
    A0A8B9TGP5, U3ICR2
    Related
    ENSAPLP00030007945.1, ENSAPLT00030009966.1
    Conserved Domains (3) summary
    pfam09006
    Location:104 → 149
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerisation
    pfam01391
    Location:47 → 100
    Collagen; Collagen triple helix repeat (20 copies)
    cl02432
    Location:142 → 254
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  4. XM_038180830.1 → XP_038036758.1  mannose-binding protein

    UniProtKB/TrEMBL
    A0A8B9TGP5, U3ICR2
    Conserved Domains (3) summary
    pfam09006
    Location:104 → 149
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerisation
    pfam01391
    Location:47 → 100
    Collagen; Collagen triple helix repeat (20 copies)
    cl02432
    Location:142 → 254
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  5. XM_038180832.1 → XP_038036760.1  mannose-binding protein

    UniProtKB/TrEMBL
    A0A8B9TGP5, U3ICR2
    Conserved Domains (3) summary
    pfam09006
    Location:104 → 149
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerisation
    pfam01391
    Location:47 → 100
    Collagen; Collagen triple helix repeat (20 copies)
    cl02432
    Location:142 → 254
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
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