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PI4KB phosphatidylinositol 4-kinase beta [ Anas platyrhynchos (mallard) ]

Gene ID: 101797185, updated on 8-Mar-2024

Summary

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Gene symbol
PI4KB
Gene description
phosphatidylinositol 4-kinase beta
Locus tag
Anapl_09530
See related
EnsemblRapid:ENSAPLG00030015564
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See PI4KB in Genome Data Viewer
Location:
chromosome: 26
Exon count:
16
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 26 NC_051797.1 (1194928..1215341)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 26 NC_040071.1 (865626..886122, complement)

Chromosome 26 - NC_051797.1Genomic Context describing neighboring genes Neighboring gene methanethiol oxidase-like Neighboring gene regulatory factor X5 Neighboring gene zinc finger protein 687 Neighboring gene proteasome 26S subunit ubiquitin receptor, non-ATPase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol 4-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4-kinase beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051797.1 Reference ZJU1.0 Primary Assembly

    Range
    1194928..1215341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038167730.1 → XP_038023658.1  phosphatidylinositol 4-kinase beta isoform X5

    UniProtKB/TrEMBL
    A0A493T281, A0A8B9QVP9
    Related
    ENSAPLP00030026730.1, ENSAPLT00030040576.1
    Conserved Domains (2) summary
    cd05168
    Location:532 → 819
    PI4Kc_III_beta; Catalytic domain of Type III Phosphoinositide 4-kinase beta
    cd22246
    Location:2 → 58
    PI4KB_NTD; N-terminal domain of phosphatidylinositol 4-kinase beta

  2. XM_027444662.2 → XP_027300463.1  phosphatidylinositol 4-kinase beta isoform X5

    UniProtKB/TrEMBL
    A0A493T281, A0A8B9QVP9
    Conserved Domains (2) summary
    cd05168
    Location:532 → 819
    PI4Kc_III_beta; Catalytic domain of Type III Phosphoinositide 4-kinase beta
    cd22246
    Location:2 → 58
    PI4KB_NTD; N-terminal domain of phosphatidylinositol 4-kinase beta

  3. XM_013106225.4 → XP_012961679.2  phosphatidylinositol 4-kinase beta isoform X1

    UniProtKB/TrEMBL
    A0A8B9QW08

  4. XM_038167729.1 → XP_038023657.1  phosphatidylinositol 4-kinase beta isoform X2

    UniProtKB/TrEMBL
    A0A8B9QW08
    Conserved Domains (2) summary
    cd05168
    Location:606 → 893
    PI4Kc_III_beta; Catalytic domain of Type III Phosphoinositide 4-kinase beta
    cd22246
    Location:76 → 132
    PI4KB_NTD; N-terminal domain of phosphatidylinositol 4-kinase beta

  5. XM_013106227.4 → XP_012961681.2  phosphatidylinositol 4-kinase beta isoform X3

    UniProtKB/TrEMBL
    A0A8B9QW08
    Related
    ENSAPLP00030026697.1, ENSAPLT00030040519.1

  6. XM_005026781.5 → XP_005026838.2  phosphatidylinositol 4-kinase beta isoform X4

    UniProtKB/TrEMBL
    A0A8B9QW08, U3I3S6
    Related
    ENSAPLP00030026664.1, ENSAPLT00030040462.1

  7. XM_027444663.2 → XP_027300464.1  phosphatidylinositol 4-kinase beta isoform X6

    UniProtKB/TrEMBL
    A0A8B9QVQ8
    Conserved Domains (1) summary
    cd05168
    Location:234 → 521
    PI4Kc_III_beta; Catalytic domain of Type III Phosphoinositide 4-kinase beta
Nucleotide Protein
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