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IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha [ Anas platyrhynchos (mallard) ]

Gene ID: 101795551, updated on 8-Mar-2024

Summary

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Gene symbol
IDH3A
Gene description
isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha
Locus tag
Anapl_02684
See related
EnsemblRapid:ENSAPLG00030001298
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See IDH3A in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 11 NC_051782.1 (8394197..8405321)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 11 NC_040056.1 (14073607..14086060, complement)

Chromosome 11 - NC_051782.1Genomic Context describing neighboring genes Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 Neighboring gene death associated protein kinase 2 Neighboring gene TBC1 domain family member 2B Neighboring gene calcium and integrin binding family member 2 Neighboring gene acyl-CoA synthetase bubblegum family member 1 Neighboring gene DnaJ heat shock protein family (Hsp40) member A4 Neighboring gene SKI8 subunit of superkiller complex

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isocitrate dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
Names
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
isocitrate dehydrogenase (NAD(+)) 3 alpha
isocitrate dehydrogenase 3 (NAD(+)) alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051782.1 Reference ZJU1.0 Primary Assembly

    Range
    8394197..8405321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027465914.2 → XP_027321715.1  isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial isoform X2

    UniProtKB/TrEMBL
    U3I2P1

  2. XM_027465913.2 → XP_027321714.1  isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8B9TJD2, U3I2P1
    Related
    ENSAPLP00030002922.1, ENSAPLT00030003569.1
Nucleotide Protein
Heading Accession and Version

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