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TENT4A terminal nucleotidyltransferase 4A [ Anas platyrhynchos (mallard) ]

Gene ID: 101790626, updated on 8-Mar-2024

Summary

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Gene symbol
TENT4A
Gene description
terminal nucleotidyltransferase 4A
Locus tag
Anapl_12859
See related
EnsemblRapid:ENSAPLG00030021559
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Also known as
PAPD7
Orthologs
human mouse all
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Genomic context

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See TENT4A in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 2 NC_051773.1 (77596127..77656019)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 2 NC_040047.1 (83554002..83584624, complement)

Chromosome 2 - NC_051773.1Genomic Context describing neighboring genes Neighboring gene NOP2/Sun RNA methyltransferase 2 Neighboring gene uncharacterized LOC113842783 Neighboring gene steroid 5 alpha-reductase 1 Neighboring gene uncharacterized LOC110354392 Neighboring gene uncharacterized LOC110354393

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A) RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAMP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: terminal nucleotidyltransferase 4A
Names
DNA polymerase sigma
poly(A) RNA polymerase D7, non-canonical

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051773.1 Reference ZJU1.0 Primary Assembly

    Range
    77596127..77656019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038174684.1 → XP_038030612.1  LOW QUALITY PROTEIN: terminal nucleotidyltransferase 4A

    Related
    ENSAPLP00030036163.1, ENSAPLT00030056214.1
    Conserved Domains (1) summary
    COG5260
    Location:290 → 595
    TRF4; DNA polymerase sigma [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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