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LOC101733844 oocyte zinc finger protein XlCOF7.1-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 101733844, updated on 26-Jun-2024

Summary

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Official Symbol
LOC101733844provided by Xenbase
Official Full Name
oocyte zinc finger protein XlCOF7.1-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-29087267
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See LOC101733844 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (3725306..3728977)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (7986650..7990373, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene H2A clustered histone 14 Neighboring gene oocyte zinc finger protein XlCOF6.1-like Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene oocyte zinc finger protein XlCOF7.1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within animal organ development IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cell differentiation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
oocyte zinc finger protein XlCOF7.1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    3725306..3728977
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031893052.1 → XP_031748912.1  oocyte zinc finger protein XlCOF7.1-like

    UniProtKB/TrEMBL
    A0A8J1ITJ3
    Conserved Domains (3) summary
    cd07765
    Location:88 → 121
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:219 → 404
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:272 → 292
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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