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Ap3b2 adaptor related protein complex 3 subunit beta 2 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101701517, updated on 8-Mar-2024

Summary

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Gene symbol
Ap3b2
Gene description
adaptor related protein complex 3 subunit beta 2
Locus tag
GW7_09432
See related
Ensembl:ENSHGLG00000007649
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Ap3b2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624768.1 (18476562..18507933, complement)

NW_004624768.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S17 Neighboring gene cytoplasmic polyadenylation element binding protein 1 Neighboring gene 40S ribosomal protein S12 pseudogene Neighboring gene uncharacterized LOC101703149 Neighboring gene fibronectin type III and SPRY domain containing 2 Neighboring gene WASP homolog associated with actin, golgi membranes and microtubules

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624768 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in anterograde synaptic vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-3 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-3 complex subunit beta-2
Names
adaptor related protein complex 3 beta 2 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624768.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    18476562..18507933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004852858.2 → XP_004852915.1  AP-3 complex subunit beta-2 isoform X3

    UniProtKB/TrEMBL
    A0A0P6K620, G5B1R3
    Related
    ENSHGLP00000010675.1, ENSHGLT00000010795.1
    Conserved Domains (4) summary
    pfam01602
    Location:34 → 590
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:123 → 262
    Cnd1; non-SMC mitotic condensation complex subunit 1
    pfam14796
    Location:805 → 948
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]

  2. XM_021264872.1 → XP_021120531.1  AP-3 complex subunit beta-2 isoform X2

    UniProtKB/TrEMBL
    G5B1R3
    Conserved Domains (3) summary
    sd00044
    Location:158 → 186
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:86 → 603
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:818 → 961
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  3. XM_021264871.1 → XP_021120530.1  AP-3 complex subunit beta-2 isoform X1

    UniProtKB/TrEMBL
    G5B1R3
    Conserved Domains (3) summary
    sd00044
    Location:158 → 186
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:86 → 637
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:852 → 995
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  4. XM_021264873.1 → XP_021120532.1  AP-3 complex subunit beta-2 isoform X4

    UniProtKB/TrEMBL
    G5B1R3
    Conserved Domains (3) summary
    sd00044
    Location:67 → 95
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:6 → 546
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:761 → 904
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  5. XM_021264874.1 → XP_021120533.1  AP-3 complex subunit beta-2 isoform X5

    Conserved Domains (2) summary
    pfam14796
    Location:441 → 584
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    cl26317
    Location:8 → 226
    Adaptin_N; Adaptin N terminal region

  6. XM_021264877.1 → XP_021120536.1  AP-3 complex subunit beta-2 isoform X7

  7. XM_021264875.1 → XP_021120534.1  AP-3 complex subunit beta-2 isoform X6

    Conserved Domains (1) summary
    pfam14796
    Location:1 → 40
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  8. XM_021264876.1 → XP_021120535.1  AP-3 complex subunit beta-2 isoform X7

RNA

  1. XR_002397597.1 RNA Sequence

  2. XR_002397596.1 RNA Sequence

  3. XR_002397599.1 RNA Sequence

  4. XR_002397598.1 RNA Sequence

Nucleotide Protein
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