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LAMA1 laminin subunit alpha 1 [ Papio anubis (olive baboon) ]

Gene ID: 101005361, updated on 8-Mar-2024

Summary

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Gene symbol
LAMA1
Gene description
laminin subunit alpha 1
See related
Ensembl:ENSPANG00000019970
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See LAMA1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
64
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 19 NC_044994.1 (6184276..6352833)
103 previous assembly Panu_3.0 (GCF_000264685.3) 18 NC_018169.2 (6310512..6481778)

Chromosome 19 - NC_044994.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 30 Neighboring gene solute carrier family 25 member 51-like Neighboring gene uncharacterized LOC116271450 Neighboring gene Rho GTPase activating protein 28 Neighboring gene 60S ribosomal protein L7-like 1 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in blood vessel morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in camera-type eye development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044994.1 Reference Panubis1.0 Primary Assembly

    Range
    6184276..6352833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031658710.1 → XP_031514570.1  laminin subunit alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A096MZ03
    Conserved Domains (10) summary
    smart00136
    Location:20 → 272
    LamNT; Laminin N-terminal domain (domain VI)
    smart00281
    Location:1217 → 1348
    LamB; Laminin B domain
    smart00282
    Location:2145 → 2284
    LamG; Laminin G domain
    cd00055
    Location:852 → 904
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2311 → 2467
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR02168
    Location:1725 → 2043
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam06008
    Location:1579 → 1834
    Laminin_I; Laminin Domain I
    pfam00054
    Location:2757 → 2886
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:906 → 952
    Laminin_EGF; Laminin EGF domain
    pfam06009
    Location:2015 → 2149
    Laminin_II; Laminin Domain II

  2. XM_031658711.1 → XP_031514571.1  laminin subunit alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A096MZ03
    Related
    ENSPANP00000005187.3, ENSPANT00000021528.3
    Conserved Domains (10) summary
    smart00136
    Location:20 → 272
    LamNT; Laminin N-terminal domain (domain VI)
    smart00281
    Location:1217 → 1348
    LamB; Laminin B domain
    smart00282
    Location:2145 → 2284
    LamG; Laminin G domain
    cd00055
    Location:852 → 904
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2311 → 2467
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR02168
    Location:1725 → 2043
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam06008
    Location:1579 → 1834
    Laminin_I; Laminin Domain I
    pfam00054
    Location:2747 → 2876
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:906 → 952
    Laminin_EGF; Laminin EGF domain
    pfam06009
    Location:2015 → 2149
    Laminin_II; Laminin Domain II

  3. XM_031658712.1 → XP_031514572.1  laminin subunit alpha-1 isoform X3

    Conserved Domains (9) summary
    smart00136
    Location:20 → 272
    LamNT; Laminin N-terminal domain (domain VI)
    smart00281
    Location:1217 → 1348
    LamB; Laminin B domain
    smart00282
    Location:2145 → 2284
    LamG; Laminin G domain
    cd00055
    Location:852 → 904
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2311 → 2446
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR02168
    Location:1725 → 2043
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam06008
    Location:1579 → 1834
    Laminin_I; Laminin Domain I
    pfam00053
    Location:906 → 952
    Laminin_EGF; Laminin EGF domain
    pfam06009
    Location:2015 → 2149
    Laminin_II; Laminin Domain II
Nucleotide Protein
Heading Accession and Version

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