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EIF5B eukaryotic translation initiation factor 5B [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100921599, updated on 8-Mar-2024

Summary

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Gene symbol
EIF5B
Gene description
eukaryotic translation initiation factor 5B
See related
Ensembl:ENSSHAG00000010146
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See EIF5B in Genome Data Viewer
Location:
chromosome: 3
Exon count:
24
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (227043580..227115162)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003831842.1 (642823..715030)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene lysozyme g1 Neighboring gene thioredoxin domain containing 9 Neighboring gene REV1 DNA directed polymerase Neighboring gene uncharacterized LOC116422324

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 5B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    227043580..227115162
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012546151.3 → XP_012401605.1  eukaryotic translation initiation factor 5B

    UniProtKB/TrEMBL
    G3W8R4
    Related
    ENSSHAP00000011819.1, ENSSHAT00000011916.2
    Conserved Domains (5) summary
    cd01887
    Location:629 → 842
    IF2_eIF5B; Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family
    PRK04004
    Location:623 → 1199
    PRK04004; translation initiation factor IF-2; Validated
    pfam11987
    Location:963 → 1064
    IF-2; Translation-initiation factor 2
    cd03703
    Location:852 → 962
    aeIF5B_II; Domain II of archaeal and eukaryotic Initiation Factor 5
    cd16266
    Location:1089 → 1183
    IF2_aeIF5B_IV; Domain IV of prokaryotic Initiation Factor 2 and archaeal and eukaryotic Initiation Factor 5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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