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THEMIS2 thymocyte selection associated family member 2 [ Canis lupus familiaris (dog) ]

Gene ID: 100856410, updated on 17-Aug-2024

Summary

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Official Symbol
THEMIS2provided by VGNC
Official Full Name
thymocyte selection associated family member 2provided by VGNC
Primary source
VGNC:VGNC:47344
See related
Ensembl:ENSCAFG00845011158
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See THEMIS2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (73025603..73062058, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (69043293..69079535, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (71859465..71896113, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (69853014..69889263, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (70882137..70899711, complement)

Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene XK related 8 Neighboring gene sphingomyelin phosphodiesterase acid like 3B Neighboring gene replication protein A2 Neighboring gene uncharacterized LOC119870383 Neighboring gene protein phosphatase 1 regulatory subunit 8 Neighboring gene small Cajal body-specific RNA 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in T cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein THEMIS2; protein THEMIS2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051806.1 Reference ROS_Cfam_1.0

    Range
    73025603..73062058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038659687.1 → XP_038515615.1  protein THEMIS2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PWF8, A0A8I3NIY5
    Related
    ENSCAFP00845015672.1, ENSCAFT00845020006.1
    Conserved Domains (1) summary
    pfam12736
    Location:265 → 514
    CABIT; Cell-cycle sustaining, positive selection,

  2. XM_038659688.1 → XP_038515616.1  protein THEMIS2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0PVW6
    Conserved Domains (1) summary
    pfam12736
    Location:237 → 486
    CABIT; Cell-cycle sustaining, positive selection,

  3. XM_038659686.1 → XP_038515614.1  protein THEMIS2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PVW6, A0A8I3NU04, A0A8P0TKM8
    Related
    ENSCAFP00845015632.1, ENSCAFT00845019957.1
    Conserved Domains (1) summary
    pfam12736
    Location:265 → 514
    CABIT; Cell-cycle sustaining, positive selection,

  4. XM_038659689.1 → XP_038515617.1  protein THEMIS2 isoform X4

    UniProtKB/TrEMBL
    A0A8C0PVN3, A0A8I3NU63, A0A8P0SVK8
    Related
    ENSCAFP00845015704.1, ENSCAFT00845020041.1
    Conserved Domains (1) summary
    pfam12736
    Location:265 → 514
    CABIT; Cell-cycle sustaining, positive selection,

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049262.1 Alternate UMICH_Zoey_3.1

    Range
    69853014..69889263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038470541.1 → XP_038326469.1  protein THEMIS2 isoform X2

  2. XM_038470542.1 → XP_038326470.1  protein THEMIS2 isoform X3

  3. XM_038470540.1 → XP_038326468.1  protein THEMIS2 isoform X1

  4. XM_038470543.1 → XP_038326471.1  protein THEMIS2 isoform X4

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

    Range
    70882137..70899711 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038595608.1 → XP_038451536.1  LOW QUALITY PROTEIN: protein THEMIS2 isoform X4

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

    Range
    71859465..71896113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038531385.1 → XP_038387313.1  protein THEMIS2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PWF8, A0A8I3NIY5
    Conserved Domains (1) summary
    pfam12736
    Location:265 → 514
    CABIT; Cell-cycle sustaining, positive selection,

  2. XM_038531386.1 → XP_038387314.1  protein THEMIS2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0PVW6
    Conserved Domains (1) summary
    pfam12736
    Location:237 → 486
    CABIT; Cell-cycle sustaining, positive selection,

  3. XM_038531384.1 → XP_038387312.1  protein THEMIS2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PVW6, A0A8I3NU04, A0A8P0TKM8
    Conserved Domains (1) summary
    pfam12736
    Location:265 → 514
    CABIT; Cell-cycle sustaining, positive selection,

  4. XM_038531387.1 → XP_038387315.1  protein THEMIS2 isoform X4

    UniProtKB/TrEMBL
    A0A8C0PVN3, A0A8I3NU63, A0A8P0SVK8
    Conserved Domains (1) summary
    pfam12736
    Location:265 → 514
    CABIT; Cell-cycle sustaining, positive selection,

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    69043293..69079535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014110154.2 → XP_013965629.1  protein THEMIS2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PWF8, A0A8P0SGZ8
    Conserved Domains (1) summary
    pfam12736
    Location:265 → 518
    CABIT; Cell-cycle sustaining, positive selection,

  2. XM_022412589.2 → XP_022268297.1  protein THEMIS2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0PVW6
    Conserved Domains (1) summary
    pfam12736
    Location:237 → 486
    CABIT; Cell-cycle sustaining, positive selection,

  3. XM_014110151.3 → XP_013965626.1  protein THEMIS2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PVW6, A0A8I3NU04, A0A8P0TKM8
    Conserved Domains (1) summary
    pfam12736
    Location:265 → 514
    CABIT; Cell-cycle sustaining, positive selection,

  4. XM_003638939.4 → XP_003638987.1  protein THEMIS2 isoform X4

    UniProtKB/TrEMBL
    A0A8C0PVN3, A0A8I3NU63, A0A8P0SVK8
    Conserved Domains (1) summary
    pfam12736
    Location:265 → 514
    CABIT; Cell-cycle sustaining, positive selection,
Nucleotide Protein
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