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LOC100804237 sulfoquinovosyl transferase SQD2 [ Glycine max (soybean) ]

Gene ID: 100804237, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100804237
Gene description
sulfoquinovosyl transferase SQD2
Locus tag
GLYMA_07G146400v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100804237 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 7 NC_038243.2 (17379761..17382678, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 7 NC_038243.1 (17510795..17513780, complement)

Chromosome 7 - NC_038243.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102663883 Neighboring gene transcription factor DIVARICATA Neighboring gene uncharacterized LOC100804764 Neighboring gene uncharacterized LOC102664401

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038243.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    17379761..17382678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006583567.4 → XP_006583630.3  sulfoquinovosyl transferase SQD2 isoform X1

    UniProtKB/TrEMBL
    A0A0R0J9M2
    Conserved Domains (1) summary
    PLN02871
    Location:1 → 366
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

  2. XM_014778003.3 → XP_014633489.1  sulfoquinovosyl transferase SQD2 isoform X2

    UniProtKB/TrEMBL
    A0A0R0J3B1, K7L1R1
    Conserved Domains (1) summary
    PLN02871
    Location:7 → 285
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
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