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LOC100798815 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [ Glycine max (soybean) ]

Gene ID: 100798815, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100798815
Gene description
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC
Locus tag
GLYMA_10G168700v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100798815 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
28
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 10 NC_038246.2 (40416965..40428811)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 10 NC_038246.1 (40305618..40317234)

Chromosome 10 - NC_038246.2Genomic Context describing neighboring genes Neighboring gene GDSL esterase/lipase At5g33370 Neighboring gene uncharacterized LOC100802355 Neighboring gene uncharacterized LOC102665526 Neighboring gene germin-like protein subfamily 1 member 13 Neighboring gene germin-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038246.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    40416965..40428811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003536104.4 → XP_003536152.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

    See identical proteins and their annotated locations for XP_003536152.1

    UniProtKB/TrEMBL
    I1LBT2, I1LBT3
    Conserved Domains (3) summary
    TIGR02917
    Location:65 → 498
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:268 → 296
    TPR; TPR repeat [structural motif]
    cl10013
    Location:519 → 955
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
Heading Accession and Version

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