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Rnf14 ring finger protein 14 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100751183, updated on 8-Mar-2024

Summary

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Gene symbol
Rnf14
Gene description
ring finger protein 14
See related
Ensembl:ENSCGRG00015026130
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Rnf14 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614499.1 (1667..18821, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (199333360..199358417, complement)

NW_003614499.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC118239988 Neighboring gene protocadherin 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614499.1 Reference CriGri_1.0 Primary Assembly

    Range
    1667..18821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003508191.5 → XP_003508239.3  E3 ubiquitin-protein ligase RNF14 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MSQ8, A0A9J7FAT7
    Conserved Domains (4) summary
    smart00647
    Location:290 → 351
    IBR; In Between Ring fingers
    cd16628
    Location:219 → 272
    RING-HC_RBR_RNF14; RING finger, HC subclass, found in RING finger protein 14 (RNF14) and similar proteins
    pfam01485
    Location:378 → 434
    IBR; IBR domain, a half RING-finger domain
    pfam05773
    Location:7 → 133
    RWD; RWD domain

  2. XM_035459676.1 → XP_035315567.1  E3 ubiquitin-protein ligase RNF14 isoform X2

    UniProtKB/TrEMBL
    A0A9J7F8J2
    Conserved Domains (3) summary
    smart00647
    Location:164 → 225
    IBR; In Between Ring fingers
    cd16628
    Location:93 → 146
    RING-HC_RBR_RNF14; RING finger, HC subclass, found in RING finger protein 14 (RNF14) and similar proteins
    pfam01485
    Location:252 → 308
    IBR; IBR domain, a half RING-finger domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    199333360..199358417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027398026.2 → XP_027253827.1  E3 ubiquitin-protein ligase RNF14 isoform X3

    UniProtKB/TrEMBL
    A0A8C2MSQ8, A0A9J7FAT7
    Related
    ENSCGRP00015034744.1, ENSCGRT00015042357.2
    Conserved Domains (4) summary
    smart00647
    Location:290 → 351
    IBR; In Between Ring fingers
    cd16628
    Location:219 → 272
    RING-HC_RBR_RNF14; RING finger, HC subclass, found in RING finger protein 14 (RNF14) and similar proteins
    pfam01485
    Location:378 → 434
    IBR; IBR domain, a half RING-finger domain
    pfam05773
    Location:7 → 133
    RWD; RWD domain

  2. XM_027398028.2 → XP_027253829.1  E3 ubiquitin-protein ligase RNF14 isoform X3

    UniProtKB/TrEMBL
    A0A8C2MSQ8, A0A9J7FAT7
    Conserved Domains (4) summary
    smart00647
    Location:290 → 351
    IBR; In Between Ring fingers
    cd16628
    Location:219 → 272
    RING-HC_RBR_RNF14; RING finger, HC subclass, found in RING finger protein 14 (RNF14) and similar proteins
    pfam01485
    Location:378 → 434
    IBR; IBR domain, a half RING-finger domain
    pfam05773
    Location:7 → 133
    RWD; RWD domain

  3. XM_027398029.2 → XP_027253830.1  E3 ubiquitin-protein ligase RNF14 isoform X4

    UniProtKB/TrEMBL
    A0A9J7F8J2
    Conserved Domains (3) summary
    smart00647
    Location:164 → 225
    IBR; In Between Ring fingers
    cd16628
    Location:93 → 146
    RING-HC_RBR_RNF14; RING finger, HC subclass, found in RING finger protein 14 (RNF14) and similar proteins
    pfam01485
    Location:252 → 308
    IBR; IBR domain, a half RING-finger domain

  4. XM_027398027.2 → XP_027253828.1  E3 ubiquitin-protein ligase RNF14 isoform X3

    UniProtKB/TrEMBL
    A0A8C2MSQ8, A0A9J7FAT7
    Related
    ENSCGRP00015034734.1, ENSCGRT00015042347.2
    Conserved Domains (4) summary
    smart00647
    Location:290 → 351
    IBR; In Between Ring fingers
    cd16628
    Location:219 → 272
    RING-HC_RBR_RNF14; RING finger, HC subclass, found in RING finger protein 14 (RNF14) and similar proteins
    pfam01485
    Location:378 → 434
    IBR; IBR domain, a half RING-finger domain
    pfam05773
    Location:7 → 133
    RWD; RWD domain
Nucleotide Protein Strain
Heading Accession and Version

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