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LOC100699779 apoptosis-enhancing nuclease [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100699779, updated on 21-Dec-2023

Summary

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Gene symbol
LOC100699779
Gene description
apoptosis-enhancing nuclease
See related
Ensembl:ENSONIG00000015622
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
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Genomic context

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See LOC100699779 in Genome Data Viewer
Location:
chromosome: LG7
Exon count:
4
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG7 NC_031972.2 (43597611..43602347)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG7 NC_031972.1 (47651046..47655737)

Linkage Group LG7 - NC_031972.2Genomic Context describing neighboring genes Neighboring gene creatine kinase U-type, mitochondrial Neighboring gene protein disulfide isomerase family A, member 3 Neighboring gene uncharacterized LOC112847374 Neighboring gene retinaldehyde binding protein 1b Neighboring gene monoacylglycerol lipase ABHD2-B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
apoptosis-enhancing nuclease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031972.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    43597611..43602347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003455401.4 → XP_003455449.2  apoptosis-enhancing nuclease

    See identical proteins and their annotated locations for XP_003455449.2

    UniProtKB/TrEMBL
    I3KEW5
    Related
    ENSONIP00000019660.2, ENSONIT00000019677.2
    Conserved Domains (2) summary
    cd06149
    Location:145 → 301
    ISG20; DEDDh 3'-5' exonuclease domain of Interferon Stimulated Gene product of 20 kDa, and similar proteins
    COG0847
    Location:141 → 319
    DnaQ; DNA polymerase III, epsilon subunit or related 3'-5' exonuclease [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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