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LOC100572095 zinc finger protein 572 [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100572095, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100572095
Gene description
zinc finger protein 572
See related
EnsemblRapid:LOC100572095
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
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Genomic context

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See LOC100572095 in Genome Data Viewer
Location:
chromosome: X
Exon count:
1
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) X NC_042493.1 (74089224..74090942)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383809.1 (224678..226260, complement)

Chromosome X - NC_042493.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC103310644 Neighboring gene zinc finger protein 2 homolog Neighboring gene uncharacterized LOC100572768

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 572

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042493.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    74089224..74090942
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003244690.4 → XP_003244738.1  zinc finger protein 572

    UniProtKB/TrEMBL
    A0A8R2A6L5
    Related
    XP_003244738.1, XM_003244690.4
    Conserved Domains (2) summary
    COG5048
    Location:3 → 192
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:36 → 56
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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