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PPIGP1 peptidylprolyl isomerase G pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100131033, updated on 12-Sep-2024

Summary

Official Symbol
PPIGP1provided by HGNC
Official Full Name
peptidylprolyl isomerase G pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:34231
See related
Ensembl:ENSG00000270442 AllianceGenome:HGNC:34231
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
5q33.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (155491145..155493821)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (156025011..156027687)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (154870705..154873381)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378239 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:154519696-154519853 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr5:154653816-154654435 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr5:154692427-154693626 Neighboring gene STN1, CST complex subunit pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:154854779-154855390 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:154963756-154964955 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:155010119-155011318 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:155063444-155063944 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23492 Neighboring gene sarcoglycan delta Neighboring gene RNA, 5S ribosomal pseudogene 199 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:155469700-155470248 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:155517127-155518326 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:155628879-155629041 Neighboring gene MPRA-validated peak5548 silencer Neighboring gene uncharacterized LOC124901120

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_028955.2 

    Range
    101..2777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    155491145..155493821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    156025011..156027687
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)