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PTGDS prostaglandin D2 synthase [ Equus caballus (horse) ]

Gene ID: 100067921, updated on 15-Aug-2024

Summary

Gene symbol
PTGDS
Gene description
prostaglandin D2 synthase
See related
Ensembl:ENSECAG00000009262
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Also known as
PGDS
Orthologs
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Genomic context

See PTGDS in Genome Data Viewer
Location:
chromosome: 25
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 25 NC_009168.3 (39149913..39153076)

Chromosome 25 - NC_009168.3Genomic Context describing neighboring genes Neighboring gene complement C8 gamma chain Neighboring gene lipocalin 12 Neighboring gene lipocalin like 1 Neighboring gene PAXX non-homologous end joining factor

Genomic regions, transcripts, and products

Genomic Sequence:
NC_009168.3 Chromosome 25 Reference EquCab3.0 Primary Assembly

General protein information

Preferred Names
prostaglandin-H2 D-isomerase
Names
PGD2 synthase
PGDS2
glutathione-independent PGD synthase
glutathione-independent PGD synthetase
lipocalin-type prostaglandin-D synthase
prostaglandin D2 synthase 21kDa (brain)
NP_001075337.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081868.1NP_001075337.1  prostaglandin-H2 D-isomerase precursor

    See identical proteins and their annotated locations for NP_001075337.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ133469
    UniProtKB/Swiss-Prot
    O97921
    UniProtKB/TrEMBL
    A0A5F5PUV8
    Related
    ENSECAP00000007190.2, ENSECAT00000009444.4
    Conserved Domains (1) summary
    pfam00061
    Location:40187
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009168.3 Reference EquCab3.0 Primary Assembly

    Range
    39149913..39153076
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)