GEO DataSets

(Submitter supplied) Although it is well established the seasonal effect of the photoperiod over the transcriptional expression patterns in plants, this effect has not been studied in microalgae. Here we fill the gap using the model microalgae Ostreococcus tauri.

Organism:

Ostreococcus tauri

Type:

Expression profiling by high throughput sequencing

Platform:

GPL28953

84 Samples

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(Submitter supplied) We test the transcriptional response of O. tauri RCC745 cells to two different copper concentration (0,4 and 2 µM), after 1, 4 and 12 h of copper amendments.

Organism:

Ostreococcus tauri

Type:

Expression profiling by high throughput sequencing

Platform:

GPL24963

30 Samples

Download data: TXT, XLSX

(Submitter supplied) Genome wide rhythmic transcription under light/dark cycles is associated with sequential transcription of specific biological processes genes in Ostreococcus tauri. Transcriptional profiling of Ostreococcus tauri under light/dark cycles. In order to identify genes with a diurnal rhythm, cells entrained under 12:12 light/dark cycles were sampled every 3 hours for 27 hours with two overlapping time points at Time 9 (Light ON at Time 9; Light OFF at Time 21) in 3 independent experiments.

Organism:

Ostreococcus tauri

Type:

Expression profiling by array

Platform:

GPL8644

27 Samples

Download data: TXT

(Submitter supplied) 1. 8096 gene-specific oligonucleotides (50-mers) were designed and synthesized by Eurogentec. 2. Oligonucleotides were resuspended at a 30 microM concentration in Nexterion Spot Solution 2X (Schott Nexterion). 3. Oligonucleotides were spotted in triplicate on Nexterion Slides E (Schott) using a Biorobotics MicroGrid II spotter (Genomic Solutions). 24k feature array comprises technical triplicates. 4. Positives (Cy3 labelled oligonucleotides) and negatives (spotting buffer) controls were added 5. Quality of spotting was checked by slide scanning using an Agilent G2565BA Microarray scanner (Agilent Technologies).

Organism:

Ostreococcus tauri

1 Series

27 Samples

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