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Items: 5

1.

Identification of the genetic loci associating with the OMV formation by means of transcriptome analysis on the isogenic BF2766 mutants in B. fragilis strain YCH46

(Submitter supplied) The human gut microbe Bacteroides fragilis can alter the expression of its surface molecules such as capsular polysaccharides and SusC/SusD family outer membrane proteins through the reversible DNA inversions.　We have revealed that the outer membrane vesicle (OMV) formation in B. fragilis is regulated by BF2766 (tyrosine recombinase)-mediated DNA inversions at two distantly located promoter regions previously designated as class IV regions. more...
Organism:
Bacteroides fragilis; Bacteroides fragilis YCH46
Type:
Expression profiling by array
Platform:
GPL13213
4 Samples
Download data: CALLS, PAIR
Series
Accession:
GSE69071
ID:
200069071

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

Identification of the regulatory circuit of PhoB in Bacteroides fragilis strain YCH46

(Submitter supplied) Comparison of transcriptional profiles of the wild-type (WT) and the phoB-mutant strain in B. fragilis strain YCH46 during phosphate (Pi) starvation.
Organism:
Bacteroides fragilis; Bacteroides fragilis YCH46
Type:
Expression profiling by array
Platform:
GPL13213
4 Samples
Download data: CALLS, PAIR
Series
Accession:
GSE27439
ID:
200027439

PubMed Full text in PMC Similar studies Analyze with GEO2R

3.

Bacteroides fragilis YCH46 gene expression 4x72K array [2007-08-21_GFC235_Bfla_60mer_4plex]

(Submitter supplied) Array is included 4,527 target genes on the glass slide by fixing at least 8 unique probes consisting of 60-mer synthetic oligonucleotides for each gene. Each probe is replicated 2 times. DESIGN_NAME: 2007-08-21_GFC235_Bfla_60mer_4plex DESIGN_ID: 6296 Protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
Organism:
Bacteroides fragilis YCH46
2 Series
8 Samples
Download data: NDF, NGD
Platform
Accession:
GPL13213
ID:
100013213

4.

WT_0.0066mM

Organism:
Bacteroides fragilis YCH46
Source name:
Bacteroides fragilis strain YCH46
Platform:
GPL13213
Series:
GSE27439
Download data: CALLS, PAIR
Sample
Accession:
GSM678273
ID:
300678273

5.

WT_6.6mM

Organism:
Bacteroides fragilis YCH46
Source name:
Bacteroides fragilis strain YCH46
Platform:
GPL13213
Series:
GSE27439
Download data: CALLS, PAIR
Sample
Accession:
GSM678272
ID:
300678272

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