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Items: 13

1.

Transcriptomic analysis of bacterial vaginosis-associated bacteria living in single or multispecies biofilms

(Submitter supplied) Bacterial vaginosis (BV) is the most common cause of vaginal discharge among women worldwide. BV is characterized by an imbalance in the vaginal microbiota with depletion of protective Lactobacillus species and overgrowth of facultative and strictly anaerobic bacteria. Although the development of a polymicrobial biofilm on the vaginal epithelium is a hallmark of BV, interactions between key BV-associated bacteria (BVAB) [i.e. more...
Organism:
Prevotella bivia; Fannyhessea vaginae; Gardnerella vaginalis
Type:
Expression profiling by high throughput sequencing
4 related Platforms
12 Samples
Download data: TXT
Series
Accession:
GSE268115
ID:
200268115
2.

Comparative transcriptomic analysis of Gardnerella vaginalis biofilms versus planktonic cultures using RNA-seq

(Submitter supplied) Bacteria assume distinct lifestyles during the planktonic and biofilm modes of growth. In biofilms, they are more tolerant to antibiotics and can evade the immune system response more effectively. However, little is known regarding the molecular determinants involved in biofilm formation by Gardnerella vaginali, the predominant species found in bacterial vaginosis (BV). Hence, to gain insight into the pathogenesis of G. more...
Organism:
Gardnerella vaginalis AMD
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21713
2 Samples
Download data: TXT
Series
Accession:
GSE80127
ID:
200080127
3.

NextSeq 2000 (Fannyhessea vaginae; Gardnerella vaginalis; Prevotella bivia)

Organism:
Gardnerella vaginalis; Prevotella bivia; Fannyhessea vaginae
1 Series
3 Samples
Download data
Platform
Accession:
GPL34517
ID:
100034517
4.

NextSeq 2000 (Gardnerella vaginalis)

Organism:
Gardnerella vaginalis
1 Series
3 Samples
Download data
Platform
Accession:
GPL34514
ID:
100034514
5.

Illumina MiSeq (Gardnerella vaginalis AMD)

Organism:
Gardnerella vaginalis AMD
1 Series
2 Samples
Download data
Platform
Accession:
GPL21713
ID:
100021713
6.

Gardnerella vaginalis single biofilms_biol rep3 (br3)

Organism:
Gardnerella vaginalis
Source name:
Gardnerella vaginalis (Gv)
Platform:
GPL34514
Series:
GSE268115
Download data
Sample
Accession:
GSM8285959
ID:
308285959
7.

Gardnerella vaginalis single biofilms_biol rep2 (br2)

Organism:
Gardnerella vaginalis
Source name:
Gardnerella vaginalis (Gv)
Platform:
GPL34514
Series:
GSE268115
Download data
Sample
Accession:
GSM8285958
ID:
308285958
8.

Gardnerella vaginalis single biofilms_biol rep1 (br1)

Organism:
Gardnerella vaginalis
Source name:
Gardnerella vaginalis(Gv)
Platform:
GPL34514
Series:
GSE268115
Download data
Sample
Accession:
GSM8285957
ID:
308285957
9.

Mixed three-species biofilms_biol rep3 (br3)

Organism:
Gardnerella vaginalis; Fannyhessea vaginae; Prevotella bivia
Source name:
Gv + Fv + Pb
Platform:
GPL34517
Series:
GSE268115
Download data
Sample
Accession:
GSM8285968
ID:
308285968
10.

Mixed three-species biofilms_biol rep2 (br2)

Organism:
Gardnerella vaginalis; Fannyhessea vaginae; Prevotella bivia
Source name:
Gv + Fv + Pb
Platform:
GPL34517
Series:
GSE268115
Download data
Sample
Accession:
GSM8285967
ID:
308285967
11.

Mixed three-species biofilms_biol rep1 (br1)

Organism:
Gardnerella vaginalis; Fannyhessea vaginae; Prevotella bivia
Source name:
Gv + Fv + Pb
Platform:
GPL34517
Series:
GSE268115
Download data
Sample
Accession:
GSM8285966
ID:
308285966
12.

Biofilm

Organism:
Gardnerella vaginalis AMD
Source name:
AMD_biofilm
Platform:
GPL21713
Series:
GSE80127
Download data
Sample
Accession:
GSM2113323
ID:
302113323
13.

Planktonic

Organism:
Gardnerella vaginalis AMD
Source name:
AMD_planktonic
Platform:
GPL21713
Series:
GSE80127
Download data
Sample
Accession:
GSM2113322
ID:
302113322
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db=gds|term=txid2702[Organism]|query=2|qty=5|blobid=MCID_673b0a507d4f604c0b90327a|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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