txid204037[Organism] - GEO DataSets

Warning: The NCBI web site requires JavaScript to function. more...

Search results

Items: 1 to 20 of 53

<< First< Prev

Page of 3

Select item 2000947131.

Role of the Dickeya dadantii PecS regulator during the early stages of plant infection

(Submitter supplied) Investigation of whole genome gene expression level changes during plant infection in the PecS regulatory mutant compared to the wild type strain. PecS is a global regulator of virulence in D. dadantii and the PecS mutant is hypervirulent.

Organism:: Dickeya dadantii 3937

Type:: Expression profiling by array

Platform:: GPL16335
13 Samples

Download data: PAIR, TXT

Series

Accession:: GSE94713

ID:: 200094713

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000647392.

Influence of NaCl on gene expression in Dickeya dadantii

(Submitter supplied) Growth in 0.3 M NaCl M63 minimal medium affects the transcriptome of Dickeya dadantii 3937.in comparison to that of cells grown in M63 medium.

Organism:: Dickeya dadantii 3937

Type:: Expression profiling by array

Platform:: GPL19609
4 Samples

Download data: FTR, TXT

Series

Accession:: GSE64739

ID:: 200064739

Analyze with GEO2R

Select item 2000425853.

Expression analysis of Dickeya dadantii 3937 infecting an aphid (Acyrthosiphon pisum clone LL01) host

(Submitter supplied) Investigation of whole genome gene expression level changes in the phytopathogenic Dickeya dadantii wild-type strain 3937 during an acute per os infection of an aphid body, in comparison with a colony grown in standard LB medium. The pathosystem described in this study has been analysed and first published in Grenier et al. 2006, and further detailed in Costechareyre et al. 2011

Organism:: Dickeya dadantii 3937

Type:: Expression profiling by array

Platform:: GPL16335
6 Samples

Download data: CALLS, PAIR

Series

Accession:: GSE42585

ID:: 200042585

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000171854.

Genome wide profiling of HrpL-regulated genes in the necrotrophic plant pathogen Dickeya dadantii 3937

(Submitter supplied) Background Dickeya dadantii is a necrotrophic pathogen causing disease in many plants. Previous studies have demonstrated that the type III secretion system (T3SS) of D. dadantii is required for full virulence. HrpL is an alternative sigma factor that binds to the hrp box promoter sequence of T3SS genes to up-regulate their expression. Methodology/Principal Findings To explore the inventory of HrpL-regulated genes of D. more...

Organism:: Dickeya dadantii

Type:: Expression profiling by array

Platform:: GPL8881
20 Samples

Download data: GPR

Series

Accession:: GSE17185

ID:: 200017185

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000045585.

Exposure to phenolic acids

(Submitter supplied) Exposure of Erwinia chrysanthemi 3937 to a combination of phenolic acids (salicylic, benzoic and t-cinnamic) each at a concentration of 0.078 mM resulted in activation of genes encoding efflux pumps and those involved in oxidative stress resistance. Keywords: phenolic acid exposure gene response

Organism:: Dickeya chrysanthemi

Type:: Expression profiling by array

Platform:: GPL3280
1 Sample

Download data: TXT

Series

Accession:: GSE4558

ID:: 200004558

Analyze with GEO2R

Select item 1000196096.

NimbleGen Dickeya dadantii 3937 array [2005-05-31_Ogg_Erwinia_24mer]

(Submitter supplied) design name: 2005-05-31_Ogg_Erwinia_24mer DESIGN_ID: 2181 A 1:2 expression design for 4597 genes from Dickeya dadantii 3937 with 20 24-mer probe pairs (PM/MM) per gene. Each probe is replicated 2 times. The design includes random GC and other control probes. Protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.

Organism:: Dickeya dadantii 3937

1 Series
4 Samples

Download data: NDF, NGD

Platform

Accession:: GPL19609

ID:: 100019609

Select item 1000163357.

UCBL-CNRS_MAP_UMR5240_Dickeya_dadantii_4.3k array [080627_Erwinia _chrysanthemi_expr]

(Submitter supplied) NimbleGen design name 080627_Erwinia _chrysanthemi_expr, NimbleGen design ID 7805 A 1:2 expression design for 4597 genes from Dickeya dadantii 3937 with 5 70-mer probe pairs (PM/MM) per gene. Each probe is replicated 3 times. The design includes random GC and other control probes. Protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.