txid1324865[Organism] - GEO DataSets - NCBI

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Items: 14

Select item 2002014561.

Transcriptome Profiling Identified Candidate Genes Contributing to Male and Female Gamete Development in Synthetic Brassica Allohexaploids

(Submitter supplied) The aim of the present study was to explore commonly and preferentially expressed genes for male and female gamete development in synthetic Brassica allohexaploids. We performed differential expression analysis to identify precise genes that regulate developmental events during male and female gamete development of Brassica allohexaploids.

Organism:: Brassica carinata x Brassica rapa

Type:: Expression profiling by high throughput sequencing

Platform:: GPL32203
9 Samples

Download data: XLS

Series

Accession:: GSE201456

ID:: 200201456

PubMed Full text in PMC Similar studies

Select item 2000462992.

Tracing the transcriptomic changes of synthetic trigenomic allohexaploid in Brassica by RNA-Seq approach

(Submitter supplied) We explored the transcriptomic changes of synthetic Brassica allohexaploid by comparing to its parents using a high-throughput RNA-Seq method. A total of 35644409 sequence reads were generated, and 32642 genes were aligned from the data. There were 29260, 29060 and 29697 genes identified in Brassica rapa, Brassica carinata, and Brassica allohexaploid, respectively. We screened differentially expressed genes (DEGs) by a standard of two-fold or greater change in expression and false discovery rate (FDR) no more than 0.001. more...

Organism:: Brassica rapa; Brassica carinata x Brassica rapa; Brassica carinata

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL17053 GPL16443 GPL16440
3 Samples

Download data: TXT

Series

Accession:: GSE46299

ID:: 200046299

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000322033.

Illumina NovaSeq 6000 (Brassica carinata x Brassica rapa)

Organism:: Brassica carinata x Brassica rapa

1 Series
9 Samples

Platform

Accession:: GPL32203

ID:: 100032203

Select item 1000170534.

Illumina HiSeq 2000 (Brassica carinata x Brassica rapa)

Organism:: Brassica carinata x Brassica rapa

1 Series
1 Sample

Platform

Accession:: GPL17053

ID:: 100017053

Select item 3060646985.

Organism:: Brassica carinata x Brassica rapa

Source name:: ovule

Platform:: GPL32203
Series:: GSE201456

Sample

Accession:: GSM6064698

ID:: 306064698

SRA Run Selector

Select item 3060646976.

Organism:: Brassica carinata x Brassica rapa

Source name:: ovule

Platform:: GPL32203
Series:: GSE201456

Sample

Accession:: GSM6064697

ID:: 306064697

SRA Run Selector

Select item 3060646967.

Organism:: Brassica carinata x Brassica rapa

Source name:: ovule

Platform:: GPL32203
Series:: GSE201456

Sample

Accession:: GSM6064696

ID:: 306064696

SRA Run Selector

Select item 3060646958.

Organism:: Brassica carinata x Brassica rapa

Source name:: anther

Platform:: GPL32203
Series:: GSE201456

Sample

Accession:: GSM6064695

ID:: 306064695

SRA Run Selector

Select item 3060646949.

Organism:: Brassica carinata x Brassica rapa

Source name:: anther

Platform:: GPL32203
Series:: GSE201456

Sample

Accession:: GSM6064694

ID:: 306064694

SRA Run Selector

Select item 30606469310.

Organism:: Brassica carinata x Brassica rapa

Source name:: anther

Platform:: GPL32203
Series:: GSE201456

Sample

Accession:: GSM6064693

ID:: 306064693

SRA Run Selector

Select item 30606469211.

Organism:: Brassica carinata x Brassica rapa

Source name:: leaf

Platform:: GPL32203
Series:: GSE201456

Sample

Accession:: GSM6064692

ID:: 306064692

SRA Run Selector

Select item 30606469112.

Organism:: Brassica carinata x Brassica rapa

Source name:: leaf

Platform:: GPL32203
Series:: GSE201456

Sample

Accession:: GSM6064691

ID:: 306064691

SRA Run Selector

Select item 30606469013.

Organism:: Brassica carinata x Brassica rapa

Source name:: leaf

Platform:: GPL32203
Series:: GSE201456

Sample

Accession:: GSM6064690

ID:: 306064690

SRA Run Selector

Select item 30112836114.

Allohexaploid-C

Organism:: Brassica carinata x Brassica rapa

Source name:: leaf

Platform:: GPL17053
Series:: GSE46299

Download data: TXT

Sample

Accession:: GSM1128361

ID:: 301128361

SRA Run Selector

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txid1324865[Organism] (14)
GEO DataSets
ATP-binding subunit of protochlorophyllide reductase (chloroplast) [Klebsormidiu...
ATP-binding subunit of protochlorophyllide reductase (chloroplast) [Klebsormidium flaccidum]
gi|649131939|ref|YP_009033653.1|

Protein
photochlorophyllide reductase subunit L (chloroplast) [Aureoumbra lagunensis]
photochlorophyllide reductase subunit L (chloroplast) [Aureoumbra lagunensis]
gi|242624321|gnl|REF_uwgmed|AulaCp0 f|YP_003002239.1|

Protein
Homologene neighbors for GEO Profiles (Select 1011067) (0)
GEO Profiles

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