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Items: 15

1.

The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA.

(Submitter supplied) 3D-topology of DNA in the cell nucleus provides a level of transcription regulation beyond the sequence of the linear DNA. To study the relationship between transcriptional activity and spatial environment of a gene, we have used allele-specific 4C-technology to produce high-resolution topology maps of the active and inactive X-chromosomes in female cells. We found that loci on the active X form multiple long-range interactions, with spatial segregation of active and inactive chromatin. more...
Organism:
Mus musculus
Type:
Genome variation profiling by high throughput sequencing
Platform:
GPL9185
28 Samples
Download data: WIG
Series
Accession:
GSE29509
ID:
200029509

PubMed Full text in PMC Similar studies SRA Run Selector

2.

R23a_NPC 129Xi-CastXa (#179)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730562
ID:
300730562

SRA Run Selector

3.

Jarid1C_Xi_NPC 129Xi-CASTXa (#137)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730561
ID:
300730561

SRA Run Selector

4.

Xist_Xi_NPC 129Xi-CASTXa (#170)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730560
ID:
300730560

SRA Run Selector

5.

Pcdh11x_Xi_NPC 129Xa-CASTXi (#169)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730559
ID:
300730559

SRA Run Selector

6.

Slitrk4 _Xi_NPC 129Xi-CASTXa (#170)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730558
ID:
300730558

SRA Run Selector

7.

MeCP2_Xi_NPC 129Xi-CASTXa (#170)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730557
ID:
300730557

SRA Run Selector

8.

Pctk1_Xi_NPC 129Xi-CASTXa (#137)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730556
ID:
300730556

SRA Run Selector

9.

R23a_NPC 129Xi-CASTXa (#137)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730555
ID:
300730555

SRA Run Selector

10.

Jarid1C_Xa_NPC 129Xa-CASTXi (#132)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730554
ID:
300730554

SRA Run Selector

11.

Pcdh11x_Xa_NPC 129Xi-CASTXa (#170)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730553
ID:
300730553

SRA Run Selector

12.

Slitrk4_Xa_NPC 129Xa-CASTXi (#169)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730552
ID:
300730552

SRA Run Selector

13.

MeCP2_Xa_NPC 129Xa-CASTXi (#169)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730551
ID:
300730551

SRA Run Selector

14.

Pctk1_Xa_NPC 129Xa-CASTXi (#132)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730550
ID:
300730550

SRA Run Selector

15.

R23a_NPC 129Xa-CASTXi (#132)

Organism:
Mus musculus
Source name:
Neural progenitor cells
Platform:
GPL9185
Series:
GSE29509
Download data: WIG
Sample
Accession:
GSM730549
ID:
300730549

SRA Run Selector

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db=gds|term=txid10090[orgn]%20AND%20%22strain%20129SvJ/CAST%22[All%20Fields]|query=1|qty=2|blobid=MCID_6635fc08679af6518b7b9bcd|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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