GEO DataSet Links for SRA (Select 18993974) - GEO DataSets - NCBI

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Items: 2

Select item 3057773081.

Organism:: Arabidopsis thaliana

Source name:: two-week-old seedlings

Platform:: GPL24270
Series:: GSE193247

Sample

Accession:: GSM5777308

ID:: 305777308

SRA Run Selector

Select item 2001932472.

RNA degradome analysis reveals substrates of NYN-domain containing DNE1 endoribonuclease in Arabidopsis

(Submitter supplied) To gain insight into the functional role of DNE1 in cytoplasmic mRNA decay, we performed Parallel Analysis of RNA Ends (PARE) and Global Mapping of Uncapped and Cleaved Transcripts (GMUCT) analysis to identify DNE1-dependent cleavage sites based on their sensitivity to XRN4 within the Arabidopsis transcriptome

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL24270 GPL17639
24 Samples

Download data: BEDGRAPH, DIFF

Series

Accession:: GSE193247

ID:: 200193247

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GEO DataSet Links for SRA (Select 18993974) (2)
GEO DataSets
isopropylmalate isomerase large subunit [Bacillus licheniformis DSM 13 = ATCC 14...
isopropylmalate isomerase large subunit [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52081309|gnl|REF_novoz|BL00613|r _080100.1|

Protein
175542[uid] (1)
Taxonomy
MULTISPECIES: SDR family NAD(P)-dependent oxidoreductase [Bacillus cereus group]
MULTISPECIES: SDR family NAD(P)-dependent oxidoreductase [Bacillus cereus group]
gi|447187242|ref|WP_001264498.1|

Protein
Mus musculus protein distantly related to to the gamma subunit family (Pr1), mRN...
Mus musculus protein distantly related to to the gamma subunit family (Pr1), mRNA
gi|9506456|ref|NM_019432.1|

Nucleotide

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