U.S. flag

An official website of the United States government

Format
Items per page
Sort by

Send to:

Choose Destination

Links from GEO DataSets

Items: 6

1.

Unraveling the dataset transcriptomic response of Hydrangea macrophylla stem to mechanical stimulation: de novo assembly and functional annotation

(Submitter supplied) To gain plant compactness, producers use plant growth regulators (PGRs), in particular growth retardants during culture. However, due to their negative environmental impacts, growth retardants are progressively withdrawn from the market. Alternative, eco-friendly methods such as mechanical stimulation (MS), which mimics the effect imposed on plants by the wind, result in reduced stem elongation, increased stem diameter and increased branching, all of which contribute to plant compactness. more...
Organism:
Hydrangea macrophylla
Type:
Expression profiling by high throughput sequencing
Platform:
GPL33625
27 Samples
Download data: FASTA, TXT
Series
Accession:
GSE238196
ID:
200238196
2.

poplar bent study-TRANSCRIPTOMIC ANALYSIS OF POPLAR STEM ACCOMMODATION TO REPEATED BENDING Species: Populus tremula x Populus aba

(Submitter supplied) affy_pop_2011_08 - poplar bent study - genes regulated by PtaZFP2 in absence of mechanical stress - genes regulated by PtaZFP2 after one bending.Species: Populus tremula x Populus alba-- The laboratory previously established a poplar transgenic line overexpressing PtaZFP2 under the control of an estradiol-inducible promoter. - the experiment, conducted on 3-month-old hydroponically-grown poplars, consists in the comparison of WT poplars treated with estradiol and the PtaZFP2-overexpressing line treated with estradiol. more...
Organism:
Populus tremula x Populus alba; Populus sp.
Type:
Expression profiling by array
Platform:
GPL4359
27 Samples
Download data: CEL
Series
Accession:
GSE44321
ID:
200044321
3.

poplar estradiol study-TRANSCRIPTOMIC ANALYSIS OF POPLAR STEM ACCOMMODATION TO REPEATED BENDING Species: Populus tremula x Populus aba

(Submitter supplied) affy_pop_2011_08 - poplar estradiol study - genes regulated by PtaZFP2 in absence of mechanical stress - genes regulated by PtaZFP2 after one bending.Species: Populus tremula x Populus alba-The laboratory previously established a poplar transgenic line overexpressing PtaZFP2 under the control of an estradiol-inducible promoter. - the experiment, conducted on 3-month-old hydroponically-grown poplars, consists in the comparison of WT poplars treated with estradiol and the PtaZFP2-overexpressing line treated with estradiol. more...
Organism:
Populus sp.; Populus tremula x Populus alba
Type:
Expression profiling by array
Platform:
GPL4359
9 Samples
Download data: CEL
Series
Accession:
GSE43533
ID:
200043533
4.

Transcriptome sequencing and microarray design for functional genomics in the extremophile Arabidopsis relative Thellungiella salsuginea

(Submitter supplied) Arabidopsis thaliana is not particularly stress tolerant and may lack protective mechanisms required to survive extreme environmental conditions. Thellungiella salsuginea has therefore attracted increasing interest as an alternative plant model species that possesses high tolerance of various abiotic stresses. While the T. salsuginea genome has recently been sequenced, its annotation is still far from complete and, due to the low number of ESTs available, evidence for actual transcriptional activity is lacking for most genes. more...
Organism:
Arabidopsis thaliana; Eutrema salsugineum
Type:
Expression profiling by array
Platforms:
GPL16263 GPL9020
24 Samples
Download data: TXT
Series
Accession:
GSE42156
ID:
200042156
5.

Vanilla planifolia Jacks., transcriptomic response towards Fusarium oxysporum f. sp. vanillae infection

(Submitter supplied) Upon exposure to unfavorable environmental conditions, plants need to respond quickly to maintain their homeostasis. For instance, physiological, biochemical and transcriptional changes occur during plant-pathogen interaction. In the case of Vanilla planifolia Jacks., a worldwide economically important crop, it is susceptible to Fusarium oxysporum f. sp. vanillae. This pathogen causes root and stem rot in vanilla plants that lead to plant death. more...
Organism:
Vanilla planifolia
Type:
Expression profiling by high throughput sequencing
Platform:
GPL26904
12 Samples
Download data: FASTA, TXT
Series
Accession:
GSE134155
ID:
200134155
6.

Comparative RNA-seq analysis of the drought-sensitive lentil (Lens culinaris) root and leaf under short- and long-term water deficits

(Submitter supplied) Drought stress is one of the main environmental factors that affects growth and productivity of crop plants, including lentil. To gain insights into the genome-wide transcriptional regulation in lentil root and leaf under short- and long-term drought conditions, we performed RNA-seq on a drought-sensitive lentil cultivar (Lens culinaris Medik. cv. Sultan). After establishing drought conditions, lentil samples were subjected to de novo RNA-seq-based transcriptome analysis. more...
Organism:
Lens culinaris
Type:
Expression profiling by high throughput sequencing
Platform:
GPL25135
18 Samples
Download data: FASTA, TXT
Series
Accession:
GSE115199
ID:
200115199
Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

db=gds|term=|query=11|qty=8|blobid=MCID_67240c98bc40331ebe7ad030|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center