Similar studies for GEO DataSets (Select 200101303) - GEO DataSets

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Items: 4

Select item 2001013031.

De novo assembly and transcriptome analysis of two different starch content Ipomoea batatas cultivars

(Submitter supplied) In this study, we compared the root transcriptomes between high and low starch content species in three different growth and development periods.This provided a new perspective and resources for the molecular mechanisms study of storage root formation and development process.

Organism:: Ipomoea batatas

Type:: Expression profiling by high throughput sequencing

Platform:: GPL23698
18 Samples

Download data: FASTA, TXT

Series

Accession:: GSE101303

ID:: 200101303

PubMed Similar studies SRA Run Selector

Select item 2000359292.

Digital Gene Expression Analysis Based on Integrated De Novo Transcriptome Assembly of Sweet Potato [Ipomoea batatas (L.) Lam.]

(Submitter supplied) More than 3.5 million raw DGE tags were obtained in each library. The clean tags in each sample ranged from 3.35 to 3.63 million, and the distinct clean tags ranged from 93,593 to 139,389. The 21 bp DGE clean tags were mapped to sweet potato transcripts. Then, we compared 7 libraries pair-wisely so that 21 pairs of comparisons were implemented. Among these comparisons, we found that 4,721 to 12,151 transcripts had significant changes in expression, and the average number was 9,657. more...

Organism:: Ipomoea batatas

Type:: Expression profiling by high throughput sequencing

Platform:: GPL15253
7 Samples

Download data

Series

Accession:: GSE35929

ID:: 200035929

PubMed Full text in PMC Similar studies

Select item 2000488343.

Temporal patterns of gene expression associated with tuberous root formation and development in sweetpotato (Ipomoea batatas)

(Submitter supplied) Investigation of whole transcriptome gene expression level during tuberous root formation and development in sweetpotato (Ipomoea batatas) cv. Guangshu 87 Identification of transcription factors (TFs) during tuberous root formation and development in sweetpotato (Ipomoea batatas) cv. Guangshu 87

Organism:: Ipomoea batatas

Type:: Expression profiling by array

Platform:: GPL17440
14 Samples

Download data: PAIR

Series

Accession:: GSE48834

ID:: 200048834

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2001280654.

Assessing the remarkable morphological diversity and transcriptomic basis of leaf shape in Ipomoea batatas (sweetpotato)

(Submitter supplied) Leaf shape is a spectacularly diverse trait that influences various aspects of plant physiology, and is even correlated with crop yield and quality in multiple species. However, only a few genetic dissections of leaf shape have been accomplished at a species-wide level. Here, we perform an initial characterization of leaf shape variation in Ipomoea batatas, the sweetpotato, at multiple scales of analysis. more...