GEO DataSets

(Submitter supplied) In the present study we analyzed centromeric localization on chromosome 12 in different orangutan and results showed that each individual exhibits a different arrangement of CENP-A binding domains.

Organism:

Pongo abelii; Pongo pygmaeus; Homo sapiens

Type:

Genome binding/occupancy profiling by genome tiling array

Platforms:

GPL21736 GPL21737

4 Samples

Download data: GFF, PAIR

(Submitter supplied) In the present study we analyzed centromeric localization on chromosome 11 in different horses and results showed that each individual exhibits a different arrangement of CENP-A binding domains.

Organism:

Equus caballus

Type:

Genome binding/occupancy profiling by genome tiling array

Platform:

GPL18727

5 Samples

Download data: GFF, PAIR

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Oryza sativa

Type:

Expression profiling by MPSS

Platforms:

GPL3776 GPL3777

2 Samples

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(Submitter supplied) The centromere is the chromosomal site for assembly of the kinetochore where spindle fibers attach during cell division. In most muticellular eukaryotes, centromeres are composed of long tracks of satellite repeats that are recalcitrant to sequencing and fine scale genetic mapping. Here we report the genomic and genetic characterization of the complete centromere of rice chromosome 3. Using a DNA fiber-fluorescence in situ hybridization approach, we demonstrated that the centromere of chromosome 3 (Cen3) contains ~414 kb of the centromeric satellite repeat CentO. more...

Organism:

Oryza sativa

Type:

Expression profiling by MPSS

Platform:

GPL3777

1 Sample

Download data

(Submitter supplied) The centromere is the chromosomal site for assembly of the kinetochore where spindle fibers attach during cell division. In most muticellular eukaryotes, centromeres are composed of long tracks of satellite repeats that are recalcitrant to sequencing and fine scale genetic mapping. Here we report the genomic and genetic characterization of the complete centromere of rice chromosome 3. Using a DNA fiber-fluorescence in situ hybridization approach, we demonstrated that the centromere of chromosome 3 (Cen3) contains ~414 kb of the centromeric satellite repeat CentO. more...

Organism:

Oryza sativa

Type:

Expression profiling by MPSS

Platform:

GPL3776

1 Sample

Download data

(Submitter supplied) We report the binding profile of A. thaliana CENH3, L. oleraceum CENH3 and Z. mays CENH3 in the genetic background of A. thaliana Col ecotype. The L. oleraceum CENH3 and Z. mays CENH3 ChIP was performed in a cenh3 homozygous mutant background expressing CENH3 homologs as transgenes.

Organism:

Arabidopsis thaliana

Type:

Genome binding/occupancy profiling by high throughput sequencing

Platforms:

GPL17639 GPL21785

11 Samples

Download data: BW, TXT