Similar studies for GEO DataSets (Select 200031400) - GEO DataSets

Warning: The NCBI web site requires JavaScript to function. more...

Format

Summary
Summary (text)
Unique Identifier List

Sort by

Default order
Number of Samples (High to Low)
Number of Samples (Low to High)

Send to:

Choose Destination

File
Clipboard
Collections

Links from GEO DataSets

Items: 4

Select item 2000314001.

Sediment Series Upper Danube River (Sediment Extract and Freeze-Dried)

(Submitter supplied) The zebrafish embryo has repeatedly proved to be a useful model for the analysis of effects by environmental toxicants. This study was performed to investigate if an approach combining mechanism-specific bioassays with microarray techniques can obtain more in-depth insights into the ecotoxicity of complex pollutant mixtures as present, e.g., in freeze-dried whole sediment samples and their corresponding organic extracts in parallel. more...

Organism:: Danio rerio

Type:: Expression profiling by array

Platform:: GPL4603
8 Samples

Download data: GPR

Series

Accession:: GSE31400

ID:: 200031400

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000305942.

Sediment Extract Series River Rhine

(Submitter supplied) The zebrafish embryo has repeatedly proved to be a useful model for the analysis of effects by environmental toxicants. This proof-of-concept study was performed to investigate if an approach combining mechanism-specific bioassays with microarray techniques can obtain more in-depth insights into the ecotoxicity of complex pollutant mixtures as present, e.g., in sediment extracts. For this end, altered gene expression was compared to data from established bioassays as well as to results from chemical analysis. more...

Organism:: Danio rerio

Type:: Expression profiling by array

Platform:: GPL4603
2 Samples

Download data: GPR, TXT

Series

Accession:: GSE30594

ID:: 200030594

Select item 2001094983.

Time and concentration dependent transcriptome signatures in the ZFE of a mixture consisting of diruon, diclofenac and naproxen

(Submitter supplied) Time and concentration dependent transcriptome signatures in the ZFE of a mixture consisting of diruon, diclofenac and naproxen. Mixture composition: diuron 11%; diclofenac 2.6%; naproxen 86.4% Keywords: Expression profiling by array

Organism:: Danio rerio

Type:: Expression profiling by array

Platform:: GPL19785
64 Samples

Download data: TXT

Series

Accession:: GSE109498

ID:: 200109498

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2002302134.

Identifying suitable experimental designs to determining differentially expressed genes and benchmark doses from transcriptomic dose-response studies in zebrafish embryos

(Submitter supplied) To identify suitable experimental designsfor toxicology experiments (i.e., sample size, pool size, number of biological replicates, and number of doses), we exposed zebrafish embryos to 0.1% dimethyl sulfoxide for 4-120 hours post fertilization. We then created 96 samples to examine the impact of pool size comprised of 1, 5, 10, and 20 zebrafish embryos each (n = 24). From these, total RNA extraction was extracted and transcriptomic analyses were done using the TempO-Seq S1500+ Surrogate Assay platform. more...