Measuring the effect of deoxycholate on Bacteroides fragilis gene expression - - GEO DataSets - NCBI

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Measuring the effect of deoxycholate on Bacteroides fragilis gene expression

(Submitter supplied) We used RNAseq as an approach to assess the B. fragilis strain p207 response to the bile salt, deoxycholic acid (DC). A 6min DC exposure dramatically remodeled the transcriptome with approximately 20% of transcripts exhibiting significant changes. Chaperones and efflux systems were among the most highly induced genes, while protein synthesis genes were strongly repressed by DC.

Organism:: Bacteroides fragilis

Type:: Expression profiling by high throughput sequencing

Platform:: GPL32937
9 Samples

Download data: TXT

Series

Accession:: GSE220692

ID:: 200220692

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Measuring the effect of deoxycholate on Bacteroides fragilis gene expression
Measuring the effect of deoxycholate on Bacteroides fragilis gene expression
Accession: GSE220692

GEO DataSets
GEO DataSet Links for BioProject (Select 911175) (1)
GEO DataSets
Homologene neighbors for GEO Profiles (Select 119188599) (0)
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Erg ETS transcription factor ERG [Rattus norvegicus]
Erg ETS transcription factor ERG [Rattus norvegicus]
Gene ID:170909

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Gene Links for GEO Profiles (Select 119194588) (1)
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