txid94885[Organism:exp] - GEO DataSets

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Select item 2002621601.

PMEL is involved in snake color pattern transition from blotches to stripes [scRNA-seq]

(Submitter supplied) Our genomic, bulk and single-cell transcriptomic, functional, and developmental characterization of the Terrazzo corn snake color morph and the extensive comparison with wild-type snakes puts forward the dual role of PMEL in snake skin coloration, both in the differentiation of chromatophores during embryogenesis and the melanogenesis in melanophores.

Organism:: Pantherophis guttatus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL34323
1 Sample

Download data: H5AD

Series

Accession:: GSE262160

ID:: 200262160

PubMed

Select item 2002621592.

PMEL is involved in snake color pattern transition from blotches to stripes [bulk RNA-seq]

Organism:: Pantherophis guttatus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL34322
6 Samples

Download data: TSV

Series

Accession:: GSE262159

ID:: 200262159

PubMed

Select item 2001395703.

Comparative analysis of squamate brains unveils multi-level variation in cerebellar architecture associated with locomotor specialization

(Submitter supplied) We exploited the extraordinary ecomorphological diversity of squamates to assess brain phenotypic diversification with respect to locomotor specialization, by integrating transcriptomic data along with other methods. We reveal significant changes in cerebellar morphology as well as dynamic gene expression that all correlate with locomotor behaviours.

Organism:: Pantherophis guttatus; Pseudopus apodus; Eryx colubrinus; Python regius; Basiliscus vittatus; Mochlus fernandi; Pogona vitticeps; Trioceros jacksonii; Dasypeltis gansi; Chrysopelea ornata

Type:: Expression profiling by high throughput sequencing; Other

10 related Platforms
10 Samples

Download data: XLSX

Series

Accession:: GSE139570

ID:: 200139570

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000790484.

Reorganization of HoxD regulatory landscapes during the evolution of a snake-like body plan

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Mus musculus; Pantherophis guttatus

Type:: Other; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL21577 GPL17021
25 Samples

Download data: BED, BEDGRAPH

Series

Accession:: GSE79048

ID:: 200079048

PubMed Full text in PMC Similar studies

Select item 2000790475.

Reorganization of HoxD regulatory landscapes during the evolution of a snake-like body plan (ChIP-seq)

(Submitter supplied) While the vertebrate body plan is highly conserved amongst all species of this taxon, extreme variations thereof can be documented in snakes, which display both an absence of limbs and an unusually elongated trunk. As Hox genes are strong candidates both for the making and the evolution of this body plan, their comparative study in such a morphologically diverged group is informative regarding their potential causative importance in these processes. more...