U.S. flag

An official website of the United States government

Format
Items per page
Sort by

Send to:

Choose Destination

Search results

Items: 15

1.

Transcriptome and expression profiling analysis revealed changes of multiple signaling pathways involved in immunity in mud crab Scylla paramamosain during Vibrio parahaemolyticus infection

(Submitter supplied) Purpose:The mud crab Scylla paramamosain is an economically important marine crab in China suffering from severe outbreaks of infectious disease caused by marine bacteria such as Vibrio Parahaemolyticus, resulting in great economic losses. However, the mechanisms involved in the immune response of this crab to bacterial infection are not fully understood. To understand the molecular mechanisms underlying the immune response to such pathogenic bacteria, we used high-throughput deep sequencing technology to investigate the transcriptome and comparative expression profiles of the mud crab S.paramamosain infected with V.parahaemolyticus. more...
Organism:
Scylla paramamosain
Type:
Expression profiling by high throughput sequencing
Platform:
GPL15893
3 Samples
Download data: FA, TXT
Series
Accession:
GSE45400
ID:
200045400
2.

Deep sequencing of microRNAs in multiple tissues of Scylla paramamosain under Vibrio parahaemolyticus infection

(Submitter supplied) Background: The Scylla paramamosain is a very important aquaculture crustacean species in the southeast coastal areas of China including Shantou. For the past few years, mud crab cultured in Niutianyang of Shantou suffered from serious diseases, especially the bacterial diseases (such as Vibrio parahaemolyticus). In eukaryotes, small RNAs can regulate gene expression in post-transcription to act on host-pathogen interaction system. more...
Organism:
Scylla paramamosain
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL15893
2 Samples
Download data: TXT
Series
Accession:
GSE39921
ID:
200039921
3.

Scylla paramamosain mature gonads: Ovary vs. Testis

(Submitter supplied) In order to identify unexpected, or indeed previously uncharacterized genes may be important in sex- or gonad development, we developed a custom cDNA microarray represent 3837 unique transcripts of Scylla paramamosain derived from our EST project. Thirty-nine putative transcripts were observed to differentially expressed in testis and ovaries (P<0.05).
Organism:
Scylla paramamosain
Type:
Expression profiling by array
Platform:
GPL10471
5 Samples
Download data: CSV
Series
Accession:
GSE22066
ID:
200022066
4.

Illumina HiSeq 2000 (Scylla paramamosain)

Organism:
Scylla paramamosain
2 Series
5 Samples
Download data
Platform
Accession:
GPL15893
ID:
100015893
5.

Mud crab 6K cDNA array version 1.0

(Submitter supplied) 1.Insert DNA of cDNA clones were PCR amplified and purified. 2.Purified insert DNA was arrayed in 96-well V-bottom plates,dried completely, re-dissolved in spotting solution (50 % DMSO) to a final concentration of 200 ng/μl. 3. Seal plates with plastics seals. 4. Incubate at 37°C for 30 minutes to aid resuspension of DNA. 5. Shake plates near maximum rotational speed on flat-bed shaker for 1 minute. more...
Organism:
Scylla paramamosain
1 Series
5 Samples
Download data
Platform
Accession:
GPL10471
ID:
100010471
6.

24hVP

Organism:
Scylla paramamosain
Source name:
24 h after V.parahaemolyticus injection
Platform:
GPL15893
Series:
GSE45400
Download data
Sample
Accession:
GSM1103572
ID:
301103572
7.

0hDZ

Organism:
Scylla paramamosain
Source name:
0 h (no V.parahaemolyticus injection)
Platform:
GPL15893
Series:
GSE45400
Download data
Sample
Accession:
GSM1103571
ID:
301103571
8.

Mix

Organism:
Scylla paramamosain
Source name:
0-24h after infection with V.parahaemolyticus (Mixture)
Platform:
GPL15893
Series:
GSE45400
Download data: FA
Sample
Accession:
GSM1103570
ID:
301103570
9.

Vp-infected group

Organism:
Scylla paramamosain
Source name:
7 different mud crab tissues mixtures (mesenteron, heart, liver, gill, brain, muscle and blood)
Platform:
GPL15893
Series:
GSE39921
Download data: TXT
Sample
Accession:
GSM981351
ID:
300981351
10.

normal group

Organism:
Scylla paramamosain
Source name:
7 different mud crab tissues mixtures (mesenteron, heart, liver, gill, brain, muscle and blood)
Platform:
GPL15893
Series:
GSE39921
Download data: TXT
Sample
Accession:
GSM981350
ID:
300981350
11.

Mature crab testis Replicate 2

Organism:
Scylla paramamosain
Source name:
testis (channel 1) ovary (channel 2)
Platform:
GPL10471
Series:
GSE22066
Download data: CSV
Sample
Accession:
GSM548581
ID:
300548581
12.

Mature crab testis Replicate 1

Organism:
Scylla paramamosain
Source name:
testis (channel 1) ovary (channel 2)
Platform:
GPL10471
Series:
GSE22066
Download data: CSV
Sample
Accession:
GSM548580
ID:
300548580
13.

Mature crab ovary Replicate 3

Organism:
Scylla paramamosain
Source name:
ovary (channel 1) testis (channel 2)
Platform:
GPL10471
Series:
GSE22066
Download data: CSV
Sample
Accession:
GSM548579
ID:
300548579
14.

Mature crab ovary Replicate 2

Organism:
Scylla paramamosain
Source name:
ovary (channel 1) testis (channel 2)
Platform:
GPL10471
Series:
GSE22066
Download data: CSV
Sample
Accession:
GSM548578
ID:
300548578
15.

Mature crab ovary Replicate 1

Organism:
Scylla paramamosain
Source name:
ovary (channel 1) testis (channel 2)
Platform:
GPL10471
Series:
GSE22066
Download data: CSV
Sample
Accession:
GSM548577
ID:
300548577
Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

db=gds|term=txid85552[Organism:noexp]|query=7|qty=2|blobid=MCID_6735e696419a5e4c05818b69|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center