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Items: 1 to 20 of 35

1.

The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation

(Submitter supplied) Illumina HiSeq2000 technology was used to generate mRNA profiles from Hebeloma cylindrosporum pre-infectious stages (2 and 4 days) compared to control mycelium. Pre-infectious and control mycelia were harvested after 2 and 4 days and used for RNA extraction. Reads of 150 bp were generated and aligned to Hebeloma cylindrosporum reference transcripts (http://genome.jgi-psf.org/Hebcy2) using CLC Genomics Workbench 8.5.1.
Organism:
Hebeloma cylindrosporum
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19500
12 Samples
Download data: TXT
Series
Accession:
GSE93184
ID:
200093184
2.

Ectomycorrhizal fungi decompose humus-rich litter material using oxidative mechanisms adapted from saprotrophic ancestors

(Submitter supplied) Decomposition of soil organic matter in forest soils is thought to be controlled by the activity of saprotrophic fungi, while biotrophic fungi including ectomycorrhizal fungi act as vectors for input of plant carbon. The limited decomposing ability of ectomycorrhizal fungi is supported by recent findings showing that they have lost many of the genes that encode hydrolytic plant cell-wall degrading enzymes in their saprophytic ancestors. more...
Organism:
Paxillus involutus; Laccaria bicolor; Coniophora puteana; Suillus luteus; Serpula lacrymans; Jaapia argillacea; Hebeloma cylindrosporum; Piloderma croceum; Hydnomerulius pinastri
Type:
Expression profiling by high throughput sequencing
9 related Platforms
54 Samples
Download data: TAB
Series
Accession:
GSE64897
ID:
200064897
3.

Gene expression changes in greenhouse Hebeloma cylindrosporum-Pinus pinaster ectomycorrhizal root tips compared to Hebeloma cylindrosporum free-living mycelium

(Submitter supplied) Illumina HiSeq technology was used to generate mRNA profiles from Hebeloma cylindrosporum ectomycorrhizal root tips compared to free-living mycelium . Ectomycorrhizal root tips were harvested after 6 months and used for RNA extraction. Reads of 100 bp were generated and aligned to Hebeloma cylindrosporum transcripts (http://genome.jgi-psf.org/Hebcy2) using CLC Genomics Workbench 6.
Organism:
Hebeloma cylindrosporum
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19500
4 Samples
Download data: TXT
Series
Accession:
GSE66156
ID:
200066156
4.

Transcriptome comparison of ectomycorrhizal, ericoid and orchid mycorrhizal fungi

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Piloderma croceum; Serendipita vermifera; Suillus luteus; Amanita muscaria; Hebeloma cylindrosporum; Oidiodendron maius; Tulasnella calospora; Paxillus involutus
Type:
Expression profiling by high throughput sequencing
10 related Platforms
42 Samples
Download data: TXT
Series
Accession:
GSE63947
ID:
200063947
5.

Gene expression changes in Hebeloma cylindrosporum- Pinus pinaster ectomycorrhizal root tips compared to Hebeloma cylindrosporum free-living mycelium

(Submitter supplied) Illumina HiSeq technology was used to generate mRNA profiles from Hebeloma cylindrosporum ectomycorrhizal root tips compared to free-living mycelium . Ectomycorrhizal root tips and control mycelium were harvested after 3 weeks and used for RNA extraction. Reads of 150 bp were generated and aligned to Hebeloma cylindrosporum transcripts (http://genome.jgi-psf.org/Hebcy2) using CLC Genomics Workbench 7.
Organism:
Hebeloma cylindrosporum
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL19500 GPL19501
6 Samples
Download data: TXT
Series
Accession:
GSE63868
ID:
200063868
6.

Illumina HiSeq 1500 (Hebeloma cylindrosporum)

Organism:
Hebeloma cylindrosporum
2 Series
5 Samples
Download data
Platform
Accession:
GPL19501
ID:
100019501
7.

Illumina HiSeq 2000 (Hebeloma cylindrosporum)

Organism:
Hebeloma cylindrosporum
5 Series
23 Samples
Download data
Platform
Accession:
GPL19500
ID:
100019500
8.

Inoculated_4d_3

Organism:
Hebeloma cylindrosporum
Source name:
Inoculated mycelium 4 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446014
ID:
302446014
9.

Inoculated_4d_2

Organism:
Hebeloma cylindrosporum
Source name:
Inoculated mycelium 4 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446013
ID:
302446013
10.

Inoculated_4d_1

Organism:
Hebeloma cylindrosporum
Source name:
Inoculated mycelium 4 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446012
ID:
302446012
11.

Inoculated_2d_3

Organism:
Hebeloma cylindrosporum
Source name:
Inoculated mycelium 2 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446011
ID:
302446011
12.

Inoculated_2d_2

Organism:
Hebeloma cylindrosporum
Source name:
Inoculated mycelium 2 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446010
ID:
302446010
13.

Inoculated_2d_1

Organism:
Hebeloma cylindrosporum
Source name:
Inoculated mycelium 2 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446009
ID:
302446009
14.

Control_4d_3

Organism:
Hebeloma cylindrosporum
Source name:
Control mycelium 4 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446008
ID:
302446008
15.

Control_4d_2

Organism:
Hebeloma cylindrosporum
Source name:
Control mycelium 4 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446007
ID:
302446007
16.

Control_4d_1

Organism:
Hebeloma cylindrosporum
Source name:
Control mycelium 4 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446006
ID:
302446006
17.

Control_2d_3

Organism:
Hebeloma cylindrosporum
Source name:
Control mycelium 2 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446005
ID:
302446005
18.

Control_2d_2

Organism:
Hebeloma cylindrosporum
Source name:
Control mycelium 2 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446004
ID:
302446004
19.

Control_2d_1

Organism:
Hebeloma cylindrosporum
Source name:
Control mycelium 2 days
Platform:
GPL19500
Series:
GSE93184
Download data: TXT
Sample
Accession:
GSM2446003
ID:
302446003
20.

H. cylindrosporum MMN 3

Organism:
Hebeloma cylindrosporum
Source name:
Mycelium_Hebeloma cylindrosporum
Platform:
GPL19500
Series:
GSE64897
Download data
Sample
Accession:
GSM1582811
ID:
301582811
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Supplemental Content

db=gds|term=txid80649[Organism:exp]|query=2|qty=14|blobid=MCID_67348c1105a7200ef876c756|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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