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Items: 13

1.

Joint analysis of transcriptome and metabolome reveals the anti-low temperature mechanism of Hosta ventricosa

(Submitter supplied) In this study, a total of 12,059 differential genes and 131 differential metabolites were obtained, and they were mainly concentrated in signal transduction and phenylpropane metabolic pathways. In the process of low temperature signal transduction, the hosta is mainly through the ion channels on the three cell membranes of COLD, CNGCs and CRLK to transmit Ca2+ inside and outside the cell to sense temperature changes, and stimulate SCRM to combine with DREB through the MAPK signal pathway and Ca2+ signal sensors such as CBL. more...
Organism:
Hosta ventricosa
Type:
Expression profiling by high throughput sequencing
Platform:
GPL29817
6 Samples
Download data: FASTA, TXT
Series
Accession:
GSE168396
ID:
200168396
2.

The evolution of CHROMOMETHYLTRANSFERASES and gene body DNA methylation in plants

(Submitter supplied) The evolution of gene body methylation (gbM) and the underlying mechanism is poorly understood. By pairing the largest collection of CHROMOMETHYLTRANSFERASE (CMT) sequences (773) and methylomes (72) across land plants and green algae we provide novel insights into the evolution of gbM and its underlying mechanism. The angiosperm- and eudicot-specific whole genome duplication events gave rise to what are now referred to as CMT1, 2 and 3 lineages. more...
Organism:
Psilotum; Equisetum; Synsepalum dulcificum; Araucaria; Juniperus virginiana; Pereskia grandiflora; Kalanchoe tomentosa; Aristolochia grandiflora; Gnetum gnemon; Urtica dioica; Cyathea; Aloe vera; Amentotaxus formosana; Cephalotaxus harringtonia; Selaginella kraussiana; Yucca brevifolia; Torreya taxifolia; Microsorum punctatum; Dacrycarpus compactus; Celtis occidentalis; Nepenthes bicalcarata; Amentotaxus argotaenia; Hypericum perforatum; Chamaecyparis hodginsii; Dacrydium balansae; Manoao colensoi; Cissus quadrangularis; Impatiens niamniamensis; Lupinus angustifolius; Cyperus papyrus; Diplazium proliferum; Papuacedrus papuana; Encephalartos horridus; Thuja sutchuenensis
Type:
Methylation profiling by high throughput sequencing
34 related Platforms
150 Samples
Download data: TXT
Series
Accession:
GSE81702
ID:
200081702
3.

Illumina NovaSeq 6000 (Yucca flaccida)

Organism:
Yucca flaccida
Download data
Platform
Accession:
GPL34297
ID:
100034297
4.

Illumina HiSeq 4000 (Hosta ventricosa)

Organism:
Hosta ventricosa
1 Series
6 Samples
Download data
Platform
Accession:
GPL29817
ID:
100029817
5.

Illumina NextSeq 500 (Yucca brevifolia)

Organism:
Yucca brevifolia
1 Series
2 Samples
Download data
Platform
Accession:
GPL21922
ID:
100021922
6.

Non-low temperature treatment of Hosta ventricosa roots_rep3

Organism:
Hosta ventricosa
Source name:
root
Platform:
GPL29817
Series:
GSE168396
Download data
Sample
Accession:
GSM5137924
ID:
305137924
7.

Non-low temperature treatment of Hosta ventricosa roots_rep2

Organism:
Hosta ventricosa
Source name:
root
Platform:
GPL29817
Series:
GSE168396
Download data
Sample
Accession:
GSM5137923
ID:
305137923
8.

Non-low temperature treatment of Hosta ventricosa roots_rep1

Organism:
Hosta ventricosa
Source name:
root
Platform:
GPL29817
Series:
GSE168396
Download data
Sample
Accession:
GSM5137922
ID:
305137922
9.

Low temperature treatment of Hosta ventricosa roots_rep3

Organism:
Hosta ventricosa
Source name:
root
Platform:
GPL29817
Series:
GSE168396
Download data
Sample
Accession:
GSM5137921
ID:
305137921
10.

Low temperature treatment of Hosta ventricosa roots_rep2

Organism:
Hosta ventricosa
Source name:
root
Platform:
GPL29817
Series:
GSE168396
Download data
Sample
Accession:
GSM5137920
ID:
305137920
11.

Low temperature treatment of Hosta ventricosa roots_rep1

Organism:
Hosta ventricosa
Source name:
root
Platform:
GPL29817
Series:
GSE168396
Download data
Sample
Accession:
GSM5137919
ID:
305137919
12.

Yucca brevifolia replicate 2

Organism:
Yucca brevifolia
Source name:
genomic DNA
Platform:
GPL21922
Series:
GSE81702
Download data
Sample
Accession:
GSM2171643
ID:
302171643
13.

Yucca brevifolia replicate 1

Organism:
Yucca brevifolia
Source name:
genomic DNA
Platform:
GPL21922
Series:
GSE81702
Download data
Sample
Accession:
GSM2171642
ID:
302171642
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Supplemental Content

db=gds|term=txid703530[Organism:exp]|query=1|qty=37|blobid=MCID_6698e4568e4788294a7d74eb|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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