txid685892[Organism:noexp] - GEO DataSets

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Items: 5

Select item 2000801171.

Transcriptional response of P. aeruginosa PA1 to bacteriophage PaP1 infection

(Submitter supplied) Explore the genome-scale phage-host interactions across different developmental infection stages

Organism:: Pseudomonas phage PaP1; Pseudomonas aeruginosa PA1; Pseudomonas aeruginosa PAO1

Type:: Expression profiling by array

Platform:: GPL21703
12 Samples

Download data: TXT

Series

Accession:: GSE80117

ID:: 200080117

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000501002.

Unlock the mystery of the hard-to-sequence phage genome: discovering a novel mechanism of bacterial immunity

(Submitter supplied) Whole-genome sequencing is an important way to understand the genetic information, gene function, biological characteristics, and living mechanisms of organisms. There is no difficulty to have mega-level genomes sequenced at present. However, we encountered a hard-to-sequence genome of Pseudomonas aeruginosa phage PaP1. The shotgun sequencing method failed to dissect this genome. After insisting for 10 years and going over 3 generations of sequencing techniques, we successfully dissected the PaP1 genome with 91,715 bp in length. more...

Organism:: Pseudomonas phage PaP1

Type:: Methylation profiling by high throughput sequencing

Platform:: GPL17610
1 Sample

Download data: CSV, GFF

Series

Accession:: GSE50100

ID:: 200050100

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000217033.

Agilent-028982 Pseudomonas aeruginosa PAO1 and bacteriophage PaP1 8X15K array [Probe Name Version]

(Submitter supplied) Array includes sequences from Pseudomonas aeruginosa bacteriophage PaP1. Arrays of this design have barcodes that begin with 16028982 or 2528982. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. more...