txid60197[Organism:noexp] - GEO DataSets - NCBI

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Items: 18

Select item 2000516551.

Transcriptional profiling of the rust fungus Cronartium quercuum f. sp. fusiforme (Cqf) during vegetative growth on 2 different hosts.

(Submitter supplied) The purpose of this study was to make a single comparison between Cqf genes expressed during the vegetative stages of infection on the telial host (oak leaf) versus the aecial host (pine stem). A large proportion of genes were expressed in both hosts and significantly differentially expressed genes were enriched for candidate fungal effectors (small secreted proteins). These results suggest that the Cqf rust fungus uses a largely common set of genes to create two very different infection phenotypes. more...

Organism:: Cronartium quercuum

Type:: Expression profiling by array

Platform:: GPL17836
16 Samples

Download data: TXT

Series

Accession:: GSE51655

ID:: 200051655

Analyze with GEO2R

Select item 1000178362.

Agilent-036930 Pine_oak1

(Submitter supplied) Arrays of this design have barcodes that begin with 16036930 or 2536930. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. more...

Organism:: Cronartium quercuum

1 Series
16 Samples

Platform

Accession:: GPL17836

ID:: 100017836

Select item 3012501933.

Organism:: Cronartium quercuum

Source name:: infected northern red oak leaves

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250193

ID:: 301250193

Select item 3012501924.

Organism:: Cronartium quercuum

Source name:: slash pine stem gall

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250192

ID:: 301250192

Select item 3012501915.

Organism:: Cronartium quercuum

Source name:: infected northern red oak leaves

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250191

ID:: 301250191

Select item 3012501906.

Organism:: Cronartium quercuum

Source name:: slash pine stem gall

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250190

ID:: 301250190

Select item 3012501897.

Organism:: Cronartium quercuum

Source name:: infected northern red oak leaves

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250189

ID:: 301250189

Select item 3012501888.

Organism:: Cronartium quercuum

Source name:: slash pine stem gall

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250188

ID:: 301250188

Select item 3012501879.

Organism:: Cronartium quercuum

Source name:: infected northern red oak leaves

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250187

ID:: 301250187

Select item 30125018610.

Organism:: Cronartium quercuum

Source name:: slash pine stem gall

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250186

ID:: 301250186

Select item 30125018511.

Organism:: Cronartium quercuum

Source name:: infected northern red oak leaves

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250185

ID:: 301250185

Select item 30125018412.

Organism:: Cronartium quercuum

Source name:: slash pine stem gall

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250184

ID:: 301250184

Select item 30125018313.

Organism:: Cronartium quercuum

Source name:: infected northern red oak leaves

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250183

ID:: 301250183

Select item 30125018214.

Organism:: Cronartium quercuum

Source name:: slash pine stem gall

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250182

ID:: 301250182

Select item 30125018115.

Organism:: Cronartium quercuum

Source name:: infected northern red oak leaves

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250181

ID:: 301250181

Select item 30125018016.

Organism:: Cronartium quercuum

Source name:: slash pine stem gall

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250180

ID:: 301250180

Select item 30125017917.

Organism:: Cronartium quercuum

Source name:: infected northern red oak leaves

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250179

ID:: 301250179

Select item 30125017818.

Organism:: Cronartium quercuum

Source name:: slash pine stem gall

Platform:: GPL17836
Series:: GSE51655

Sample

Accession:: GSM1250178

ID:: 301250178

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