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Items: 7

1.

Virome of monocotyledonous weeds growing at crop fields revealed infection with several viruses and suggested their virus reservoir role

(Submitter supplied) During a proof-of-concept study, virome of millet, grown as weed was determined by small RNA HTS. As a result, from the pools of 20 randomly collected millet samples collected at two locations, we identified the presence of three viruses, two of them first time in Hungary. Based on our results we could only suspect that these viruses: wheat streak mosaic virus (WSMV), barley stripe mosaic virus (BYSMV) and barley virus G (BVG) could have been overwintered in millet or other monocotyledonous weeds growing at these fields. more...
Organism:
Zea mays; Setaria viridis; Cynodon dactylon; Echinochloa crus-galli; Panicum miliaceum; Sorghum halepense
Type:
Other
6 related Platforms
7 Samples
Download data: TXT
Series
Accession:
GSE270076
ID:
200270076
2.

Millet can be infected with several viruses if grown as a weed on crop fields

(Submitter supplied) Millet is a dangerous weed in Hungary. Lack of seed dormancy helps it to spread easily and be present at maize, wheat and other crop fields. Our previous report revealed the possibility that millet can also play a role as a virus reservoir. In that study we detected the presence of several viruses in millet using DAS ELISA. Because serological methods can only detect the presence of the investigated particular pathogens, we suspected that other, previously unknown viruses can also be present in this weed. more...
Organism:
Panicum miliaceum
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL28341
2 Samples
Download data: TXT
Series
Accession:
GSE147185
ID:
200147185
3.

Illumina HiSeq 2000 (Panicum miliaceum)

Organism:
Panicum miliaceum
2 Series
4 Samples
Download data
Platform
Accession:
GPL28341
ID:
100028341
4.

millet_BA

Organism:
Panicum miliaceum
Source name:
plant leaf
Platform:
GPL28341
Series:
GSE270076
Download data: TXT
Sample
Accession:
GSM8334037
ID:
308334037
5.

millet_US

Organism:
Panicum miliaceum
Source name:
plant leaf
Platform:
GPL28341
Series:
GSE270076
Download data: TXT
Sample
Accession:
GSM8334033
ID:
308334033
6.

222_US

Organism:
Panicum miliaceum
Source name:
leaf
Platform:
GPL28341
Series:
GSE147185
Download data: TXT
Sample
Accession:
GSM4420059
ID:
304420059
7.

221_BA

Organism:
Panicum miliaceum
Source name:
leaf
Platform:
GPL28341
Series:
GSE147185
Download data: TXT
Sample
Accession:
GSM4420058
ID:
304420058
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db=gds|term=txid4540[Organism:exp]|query=1|qty=7|blobid=MCID_6729e24c098d4d34591129fe|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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