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Functional Genomics Studies

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Select item 2002127681.

Concomitant downregulation of neuropeptide precursors in a marine snail with consecutive sexual maturation after a nuclear disaster in Japan

(Submitter supplied) Consecutive sexual maturation (CSM), an abnormal reproductive phenomenon of a marine snail, Reishia clavigera, has occurred since 2017 in the vicinity of the Fukushima Daiichi Nuclear Power Plant after the nuclear disaster there. To determine the molecular basis for CSM, we conducted transcriptome profiling in the ganglia of normal and CSM snails.

Organism:: Reishia clavigera

Type:: Expression profiling by high throughput sequencing

Platform:: GPL32637
13 Samples

Download data: TXT

Series

Accession:: GSE212768

ID:: 200212768

PubMed Full text in PMC Similar studies

Select item 2001026312.

Understanding microRNA regulation involved in metamorphosis of the veined rapa whelk (Rapana venosa)

(Submitter supplied) The veined rapa whelk (Rapana venosa) is widely consumed in China but is also a predator that is reducing bivalves resources in oceans worldwide. Larval metamorphosis of this species, a pelagic to benthic transition that involves considerable structural and physiological changes, plays a pivotal role in its commercial breeding and natural populations. Thus, the endogenous microRNA that drive this transition attract considerable interest. more...

Organism:: Rapana venosa

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL20664
9 Samples

Download data: TXT

Series

Accession:: GSE102631

ID:: 200102631

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000705483.

Transcriptomic Analysis of Differentially Expressed Genes during Larval Development of Rapana Venosa by Digital Gene Expression Profiling

(Submitter supplied) In present study, digital gene expression (DGE) profiling was performed to obtain a general picture of the transcriptomic implicated in the early development of R. venosa. Eighteen DGE libraries at six developmental stages of R. venosa were constructed, sequenced by IIIumina HiSeq 2500 platform.

Organism:: Rapana venosa

Type:: Expression profiling by high throughput sequencing

Platform:: GPL20664
18 Samples

Download data: FASTA, TXT

Series

Accession:: GSE70548

ID:: 200070548

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000326374.

HiSeq X Ten (Reishia clavigera)

Organism:: Reishia clavigera

1 Series
13 Samples

Platform

Accession:: GPL32637

ID:: 100032637

Select item 1000206645.

Illumina HiSeq 2500 (Rapana venosa)

Organism:: Rapana venosa

2 Series
27 Samples

Platform

Accession:: GPL20664

ID:: 100020664

Select item 3065475106.

male marine snail, consecutive sexual maturation [OK-M3_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547510

ID:: 306547510

SRA Run Selector

Select item 3065475097.

male marine snail, consecutive sexual maturation [OK-M2_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547509

ID:: 306547509

SRA Run Selector

Select item 3065475088.

male marine snail, consecutive sexual maturation [OK-M1_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547508

ID:: 306547508

SRA Run Selector

Select item 3065475079.

female marine snail, consecutive sexual maturation [OK-F3_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547507

ID:: 306547507

SRA Run Selector

Select item 30654750610.

female marine snail, consecutive sexual maturation [OK-F2_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547506

ID:: 306547506

SRA Run Selector

Select item 30654750511.

female marine snail, consecutive sexual maturation [OK-F1_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547505

ID:: 306547505

SRA Run Selector

Select item 30654750412.

male marine snail, normal [HS-M3_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547504

ID:: 306547504

SRA Run Selector

Select item 30654750313.

male marine snail, normal [HS-M2_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547503

ID:: 306547503

SRA Run Selector

Select item 30654750214.

male marine snail, normal [HS-M1_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547502

ID:: 306547502

SRA Run Selector

Select item 30654750115.

female marine snail, normal [HS-F4_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547501

ID:: 306547501

SRA Run Selector

Select item 30654750016.

female marine snail, normal [HS-F3_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547500

ID:: 306547500

SRA Run Selector

Select item 30654749917.

female marine snail, normal [HS-F2_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547499

ID:: 306547499

SRA Run Selector

Select item 30654749818.

female marine snail, normal [HS-F1_1/2]

Organism:: Reishia clavigera

Source name:: ganglion

Platform:: GPL32637
Series:: GSE212768

Download data: TXT

Sample

Accession:: GSM6547498

ID:: 306547498

SRA Run Selector

Select item 30274205219.

post larvae [PL-3]

Organism:: Rapana venosa

Source name:: post larvae

Platform:: GPL20664
Series:: GSE102631

Sample

Accession:: GSM2742052

ID:: 302742052

SRA Run Selector

Select item 30274205120.

post larvae [PL-2]

Organism:: Rapana venosa

Source name:: post larvae

Platform:: GPL20664
Series:: GSE102631

Sample

Accession:: GSM2742051

ID:: 302742051

SRA Run Selector

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txid39475[Organism:exp] (45)
GEO DataSets
MAG: Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_41_34 rifcsplowo2...
MAG: Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_41_34 rifcsplowo2_01_scaffold_46519, whole genome shotgun sequence
gi|1084455459|gb|MGKG01000016.1||gn :MGKG01|rifcsplowo2_01_scaffold_46519

Nucleotide
L-arabinose isomerase [Thermotoga maritima MSB8]
L-arabinose isomerase [Thermotoga maritima MSB8]
gi|499079016|gnl|REF_bioengucsd|Tma 74|ref|YP_007976625.1|

Protein
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Bacillus megaterium ...
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Bacillus megaterium WSH-002]
gi|384049182|ref|YP_005497199.1|

Protein
GSM1851252[Accession] (3)
GEO DataSets

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