txid306[Organism:noexp] - GEO DataSets

Select item 2002119391.

Whole-transcriptome microarray analysis of Pseudomonas syringae pv. actinidiae CRAFRU 8.43 and Pseudomonas syringae pv. tomato DC3000 grown in apoplast-like conditions supplemented or not with kiwifruit or tomato extract

(Submitter supplied) Purpose: The outcome of host–pathogen interactions is thought to reflect the offensive and defensive capabilities of both players. When plants interact with Pseudomonas syringae, several well-characterized virulence factors contribute to early bacterial pathogenicity, including the type III secretion system (T3SS), which must be activated by signals from the plant and environment to allow the secretion of virulence effectors. more...

Organism:: Pseudomonas sp.; Pseudomonas syringae pv. actinidiae str. CRAFRU8.43; Pseudomonas syringae pv. tomato str. DC3000

Type:: Expression profiling by array

Platform:: GPL29584
36 Samples

Download data: TXT

Series

Accession:: GSE211939

ID:: 200211939

PubMed Full text in PMC Similar studies

Select item 2001644722.

Whole-transcriptome microarray analysis of different biovars of Pseudomonas syringae pv. actinidiae grown in rich medium or apoplast-like conditions

(Submitter supplied) Purpose: Pseudomonas syringae pv. actinidiae (Psa) is a phytopathogen that causes devastating bacterial canker in kiwifruit. Among five biovars defined by genetic, biochemical and virulence traits, Psa3 is the most aggressive and is responsible for the most recent reported outbreaks, but the molecular basis of its heightened virulence is unclear. A custom P. syringae multi-strain whole-genome microarray platform, encompassing biovars Psa1, Psa2 and Psa3 and the well-established model P. more...

Organism:: Pseudomonas syringae pv. actinidiae; Pseudomonas sp.; Pseudomonas syringae pv. tomato

Type:: Expression profiling by array

Platform:: GPL29584
60 Samples

Download data: TXT

Series

Accession:: GSE164472

ID:: 200164472

Select item 2001378063.

Whole-transcriptome microarray analysis of Pseudomonas syringae pv. actinidiae (Psa) treated with Gunpowder green tea extract (EGCG 0.4 mg/ml)

(Submitter supplied) Purpose: Microarray technologies provide a unique opportunity to deeply investigate bacterial molecular responses to treatments. Pseudomonas syringae pv. actinidiae (Psa) is the causal agent of the bacterial canker of kiwifruit causing severe economic losses worldwide. At present, integrated control strategies include chemical treatments with copper-based products and preventive measures but the high virulence and fast spreading of the bacterium are hardly controlled by such measures, and especially copper use is questioned because of the possible appearance of copper resistant bacterial strains. more...

Organism:: Pseudomonas sp.; Pseudomonas syringae pv. actinidiae

Type:: Expression profiling by array

Platform:: GPL27505
6 Samples

Download data: TXT

Series

Accession:: GSE137806

ID:: 200137806

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000261734.

Agilent-078853 pseudomonas_multispecies

(Submitter supplied) Multispecies microarray aimed to interrogate coding genes expression of 5 Pseudomonas strains (PstDC3000, PsaCRAFRU8.43, PsaICMP18884, PsaICMP19073 and PsaNCPPB3739) and 3 ICEs (ICE1-3 obtained from genome annotations of the PsaM7, PsaICMP18744 and PsaICMP19455 strain, respectively). Genome annotations referred to Udine and Udine-cured were retrieved from Marcelletti et al., 2011 (Pseudomonas syringae pv. more...

Organism:: Pseudomonas sp.

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Platform

Accession:: GPL26173

ID:: 100026173

Select item 1000295845.

Agilent-078853 pseudomonas_multispecies

(Submitter supplied) Multispecies microarray aimed to interrogate coding genes expression of 5 Pseudomonas strains (PstDC3000, PsaCRAFRU8.43, PsaICMP18884, PsaICMP19073 and PsaNCPPB3739) and 3 ICEs (ICE1-3 obtained from genome annotations of the PsaM7, PsaICMP18744 and PsaICMP19455 strain, respectively). Genome annotations referred to Udine and Udine-cured were retrieved from Marcelletti et al., 2011 (Pseudomonas syringae pv. more...

Organism:: Pseudomonas sp.

2 Series
96 Samples

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Platform

Accession:: GPL29584

ID:: 100029584

Select item 1000275056.

Agilent-078853 Pseudomonas_multispecies [Agilent Feature Numbers version]

(Submitter supplied) Multispecies microarray aimed to interrogate coding genes expression of 5 Pseudomonas strains (PstDC3000, PsaCRAFRU8.43, PsaICMP18884, PsaICMP19073 and PsaNCPPB3739) and 3 ICEs (ICE1-3 obtained from genome annotations of the PsaM7, PsaICMP18744 and PsaICMP19455 strain, respectively). Genome annotations referred to Udine and Udine-cured were retrieved from Marcelletti et al., 2011 (Pseudomonas syringae pv. more...

Organism:: Pseudomonas sp.

1 Series
6 Samples

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Platform

Accession:: GPL27505

ID:: 100027505

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