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Items: 11

1.

Concerted metabolic shifts give new insights into the syntrophic mechanism between propionate-fermenting Pelotomaculum thermopropionicum and hydrogenotrophic Methanocella conradii

(Submitter supplied) Purpose: To understand the adaptive mechanisms of Methanocellales to low H2 and syntrophic growth. Methods: We analyzed the transcriptomes of M. conradii and P. thermopropionicum under monoculture and syntrophic coculture conditions by strand specific mRNA sequencing using Illumina Hiseq 2000. Four biological replicates were sequenced. The sequence reads that passed quality filters were analyzed by Burrows–Wheeler Aligner (BWA) followed by HTSeq and DESeq2. more...
Organism:
Pelotomaculum thermopropionicum; Methanocella conradii
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL23995 GPL23994 GPL23993
12 Samples
Download data: TXT
Series
Accession:
GSE103596
ID:
200103596

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Pelotomaculum thermopropionicum)

Organism:
Pelotomaculum thermopropionicum
1 Series
4 Samples
Download data
Platform
Accession:
GPL23995
ID:
100023995

3.

Illumina HiSeq 2000 (Methanocella conradii; Pelotomaculum thermopropionicum)

Organism:
Pelotomaculum thermopropionicum; Methanocella conradii
1 Series
4 Samples
Download data
Platform
Accession:
GPL23994
ID:
100023994

4.

MP_rep4

Organism:
Pelotomaculum thermopropionicum; Methanocella conradii
Source name:
M. conradii_P. thermopropionicum_anaerobic_cocultures
Platform:
GPL23994
Series:
GSE103596
Download data
Sample
Accession:
GSM2775071
ID:
302775071

SRA Run Selector

5.

MP_rep3

Organism:
Pelotomaculum thermopropionicum; Methanocella conradii
Source name:
M. conradii_P. thermopropionicum_anaerobic_cocultures
Platform:
GPL23994
Series:
GSE103596
Download data
Sample
Accession:
GSM2775070
ID:
302775070

SRA Run Selector

6.

MP_rep2

Organism:
Pelotomaculum thermopropionicum; Methanocella conradii
Source name:
M. conradii_P. thermopropionicum_anaerobic_cocultures
Platform:
GPL23994
Series:
GSE103596
Download data
Sample
Accession:
GSM2775069
ID:
302775069

SRA Run Selector

7.

MP_rep1

Organism:
Methanocella conradii; Pelotomaculum thermopropionicum
Source name:
M. conradii_P. thermopropionicum_anaerobic_cocultures
Platform:
GPL23994
Series:
GSE103596
Download data
Sample
Accession:
GSM2775068
ID:
302775068

SRA Run Selector

8.

P_rep4

Organism:
Pelotomaculum thermopropionicum
Source name:
P. thermopropionicum_anaerobic_monocultures
Platform:
GPL23995
Series:
GSE103596
Download data
Sample
Accession:
GSM2775075
ID:
302775075

SRA Run Selector

9.

P_rep3

Organism:
Pelotomaculum thermopropionicum
Source name:
P. thermopropionicum_anaerobic_monocultures
Platform:
GPL23995
Series:
GSE103596
Download data
Sample
Accession:
GSM2775074
ID:
302775074

SRA Run Selector

10.

P_rep2

Organism:
Pelotomaculum thermopropionicum
Source name:
P. thermopropionicum_anaerobic_monocultures
Platform:
GPL23995
Series:
GSE103596
Download data
Sample
Accession:
GSM2775073
ID:
302775073

SRA Run Selector

11.

P_rep1

Organism:
Pelotomaculum thermopropionicum
Source name:
P. thermopropionicum_anaerobic_monocultures
Platform:
GPL23995
Series:
GSE103596
Download data
Sample
Accession:
GSM2775072
ID:
302775072

SRA Run Selector

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